Erythrobacter sp. KY5: CD351_13080
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Entry
CD351_13080 CDS
T05511
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
erk
Erythrobacter sp. KY5
Pathway
erk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
erk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD351_13080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erk03400
]
CD351_13080
DNA repair and recombination proteins [BR:
erk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD351_13080
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CD351_13080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
AAA_22
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
AWW75363
LinkDB
All DBs
Position
2747982..2750177
Genome browser
AA seq
731 aa
AA seq
DB search
MSDLIIRRGLEEPETGEEFTPHRPNRPEKSMPGKKFKLVSDYEPAGDQPTAIKELVEGAL
AGDQTQTLLGVTGSGKTFTMAKVIETLQRPALILAPNKILAAQLYGEMKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMVFDIKKDETVDQRELIRKLVALQYKRNDAAFTRGCFRVRGDNLELFPSHYED
MAWRISFFGDEIEEIAEFDPLTGKTGAKLDKVRVYANSHYVTPGPTMKQATQAIKFELEH
RLKELEEEGKLLEHQRLEQRTHFDLEMIAATGSCNGIENYSRFLTGRLPGEPPPTLFEYL
PENALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
FAVSATPGPWEIEQTGGVFAEQVIRPTGLIDPPVEIRPVEDQVQDCIQECLATARKGYRT
LVTTLTKRMAEDLTEFMHEAGVKVRYMHSDVETLERIELIRDLRMGVYDVLIGINLLREG
LDIPECGLVCILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRITGSMERAMAETD
RRREKQRAYNEEHGITPQTIKRDIADIVAHTASQDGVTVDTGDDEVNNLVGHNLRSYIED
LEKRMRDAAANLEFEEAGRLRDEIRRLENDELGLPDDQKKAPRVGRSNEGKPGTRKTRYG
KTRYKRMGGKP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctcatcatccgccgcggtctcgaagaacctgaaactggagaggaattcacc
cctcaccgccccaaccgcccggaaaaatcgatgccgggcaagaagttcaagctggtctcg
gattacgaaccggcgggcgatcagccgaccgcgataaaggagctggtcgaaggcgcgctt
gccggtgatcagacgcagacgctgctgggtgtgacgggttcgggtaagaccttcaccatg
gccaaggtgatcgagacgcttcagcgccccgccctgatcctcgcgcccaacaagatcctc
gccgcgcagctttacggagagatgaaaagcttctttcctgaaaacgcagtcgagtatttc
gtcagctattacgattactaccagcccgaagcctacgtcccgcgctccgacacctacatc
gaaaaagagtcgagcgtgaacgaggcgatcgaccggatgcgtcactcggccactcgcgcg
ttgctggagcgggacgacgtgatcatagttgcctcggtttcgtgcctttacggtatcggt
tcggttgaaacctattcggcgatggtcttcgacatcaagaaggacgaaaccgtcgaccag
cgcgagctgatccgcaaactcgtcgccttgcagtacaagcgcaacgacgccgccttcacg
cgcggatgtttccgggtgcgcggcgacaacctcgaactgtttcccagccactacgaagac
atggcatggcgtatcagcttcttcggtgatgagattgaagagattgcagaattcgacccg
ctgaccggcaagaccggtgcgaagctcgataaggtgcgcgtttacgccaattcgcactat
gtgacgcccggcccgacgatgaaacaggcgacgcaggcgatcaagttcgagctggagcat
cgcctgaaggagcttgaggaagagggcaagctgttggagcaccagcggcttgaacagcgc
acgcatttcgaccttgaaatgatcgccgcgaccggcagctgcaacgggatcgagaactat
tcgcgcttcctcaccggacgccttccgggtgagccaccgccgaccctgttcgaatacctt
cccgaaaacgcgctgctgtttgtcgatgaaagccaccagaccgtgccgcagatcggcgcg
atggcgcgcggggaccaccgccgcaagatcacgcttgccgaatatggctttcgcctgccg
tcctgcatcgacaaccgtcccttacgcttcaacgaatgggacgcgatgcgaccgcagacc
tttgcggtatcggccacacccggcccgtgggagatcgagcagaccggcggcgtctttgcc
gaacaggtcatccgccccaccggcctgatcgacccgccggtcgaaatcagacctgtagag
gatcaggttcaggactgcattcaggaatgcctcgccaccgccaggaaaggctaccggacg
ctggtcaccacgctgacaaagcgcatggcggaagacctcaccgaattcatgcacgaagcg
ggcgtcaaggtccgttacatgcactccgacgtagagacgctggagcgcatcgagctgatc
cgcgacttgcgcatgggcgtgtacgatgtgctgatcgggatcaacctgttgcgcgagggg
ctcgacattcccgaatgcgggctggtctgcatcctcgatgccgacaaggaagggtttctg
cgctcggagaccagcctcgtccagacgattggccgcgccgcgcgcaacgtcgatggccgc
gtcatcctctatgccgaccgcatcaccggatcgatggagcgcgcaatggccgaaaccgac
cgtcgccgcgaaaagcaacgggcgtataacgaagagcacggcatcacgccccagacgatc
aagcgcgacattgcggacatcgtcgctcacaccgcttcgcaggacggcgtcacggtcgat
accggcgatgacgaggtcaacaacctggtcgggcacaatttgcgcagctacatcgaagac
ctcgaaaagcgcatgcgcgatgccgccgcgaacctcgaattcgaagaagccggacgcctg
cgcgacgaaatccgccggctcgagaacgacgaacttggcctgcccgacgatcagaagaaa
gcgccgcgcgtgggccgctccaatgaaggcaagccggggacgcgcaaaacgcggtatggc
aagacgcgatacaagaggatgggcgggaagccttaa
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