Erythrobacter sp. KY5: CD351_15630
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Entry
CD351_15630 CDS
T05511
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
erk
Erythrobacter sp. KY5
Pathway
erk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CD351_15630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erk03400
]
CD351_15630
Enzymes [BR:
erk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CD351_15630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CD351_15630
DNA repair and recombination proteins [BR:
erk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CD351_15630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AWW75860
UniProt:
A0A2Z4K3P6
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All DBs
Position
3309963..3310778
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AA seq
271 aa
AA seq
DB search
MPELPEVETTVRGLARFLDGARIERVTLNRPDLRRPFPPDLVQVMTGAQVTGLSRRAKYG
LIHLDRGSTMIFHLGMSGRWRIDPEEADKHDHLLLEAAGHRFALCDPRRFGSVDLEPTET
LGDWPQFSAMGPEPLGPDFSPEQLKTALKGKTQSIKLCLLDQRIVAGLGNIYVCEALWRS
GIHPLKAGGKVTRPQLARLVPAIRNVLTASIKDGGSSLRDYAAPDGELGYFATRFDVYGR
TGEPCRREDGGKIRRIAQGGRSTWYCVKCQC
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacccgaagtcgaaacaaccgtgcgcgggcttgcccgtttcctcgatggt
gcgcggatcgagcgagtgacgctgaatcgccccgatttgcgccgcccgttcccgcctgat
ctcgtacaggtgatgaccggtgcgcaggtcacagggctctcgcgccgggcgaaatatggc
ctcattcacctcgatcgcggatcgacgatgatctttcacctgggcatgagcggtcgctgg
cggatcgaccctgaggaagccgacaagcacgaccacctgctgctggaagctgccgggcac
cgcttcgccctgtgtgatccccgtcgcttcgggtcggtggaccttgaaccgaccgagaca
ctgggcgattggccgcagttctccgctatgggcccggaaccgcttggccccgacttctct
cccgaacagctcaagacagcgctcaagggcaagacgcagagcatcaaattgtgcctgctg
gaccagcgtatcgttgcagggctcggcaatatctatgtgtgcgaggcgctttggcgctcg
ggcattcatccgctcaaggccgggggcaaggtgacgcggcctcagcttgcgcggctcgtc
cccgcgatccggaatgtcctcaccgcttcgatcaaggacggcggatcttcgctcagggat
tacgccgcgcccgatggcgaacttggctatttcgcgacgcgctttgatgtttatggacga
acgggcgagccttgcaggcgcgaagacggcggcaaaatccgtaggatcgcgcagggtgga
cgaagcacctggtactgcgtaaagtgccaatgctag
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