Erysipelothrix larvae: AOC36_00985
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Entry
AOC36_00985 CDS
T04263
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
erl
Erysipelothrix larvae
Pathway
erl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
erl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOC36_00985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erl03021
]
AOC36_00985
03400 DNA repair and recombination proteins [BR:
erl03400
]
AOC36_00985
Enzymes [BR:
erl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOC36_00985
Transcription machinery [BR:
erl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOC36_00985
DNA repair and recombination proteins [BR:
erl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOC36_00985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PA_decarbox
MCM_WH_arc
Motif
Other DBs
NCBI-ProteinID:
AMC92617
UniProt:
A0A0X8GY80
LinkDB
All DBs
Position
199331..203110
Genome browser
AA seq
1259 aa
AA seq
DB search
MSINNFASIQLALASPERIFEWSYGEVKKPETINYRSQKPERDGLFCERIFGPTKDWECY
CGKYKKVRYRGVVCDRCGVEVTKASVRRERMGHIELAAPVAHIWYLRGIPSRMSLLLNIT
PKNLEEVVYFVKWVVTDPRDTNLEYKQILNEKEYRDYQQEFGYVSFEAQTGAEAIRTLLA
QADLDAEHQDIMAQLESAKGDKRRRLIRRLETVEAFINSDNKPEWMVLSVLPVIPPDLRP
MLQLDGGRFAASDLNDLYRRVITRNNRLKKLLEMGTPAIIVQNEKRMLQEAVDALIDNGR
RSKPVTGAGGRPLKSLSHNLKGKQGRFRQNLLGKRVDFSGRSVIAVGPDLKMYECGIPKE
MAINLFKPFVVNEMKIRGISNNAKAAEKLIERQDPRVWDVVEDVIRDHPVLLNRAPTLHR
LGIQAFKPKLIEGRAIRLHPLVTPAFNADFDGDQMAVHVPLSEMAQAEAEILMLGSHNIL
GPKDGKPIVTPSQDMVLGNFYLTMEETKEEFFEKADELESLGDFQGAEKWRNFGNNQGKA
FRSVNEARLAYEQGFIHLHTRICIRAASLNKGNFSAKQNGLYLITTLGKLIFNEMFPSDF
PYLNEVNKDNFKTTPDKFFVQMGQDVPEIISQMPLNADFKKKDLEIIIKEIFDRYSTDKT
SEILDQIKDLGFLYSTRAGMTVALSDINVAPNKQKYIDEGKEKAVRLMTQFDRGLLTPQE
WEGKLMQLWDGVKNVVGSELMQNLERKNPINMMATSGARGNVSNFTQLAGMRGLMARPTQ
SKSNKGFQPSIIEVPIYSSFREGLNVSEFFNSTHGVRKGMTDTALKTAESGYLTRRLVDV
AQDVMITEDDCGAAEGYVVAEIIDQKSNTIIESLYDRLVGRYIKETIVDPKTKEVIIEED
EFIDEIIARRIVNSGIKEVSIRNVFTCEAKHGICAKCYGRNMATGQVVEGGEAVGIMAAQ
SIGEPGTQLTMRTFHTGGVATAGGEDITQGLPRVEELFEARTPKLAAIISEITGEVTDIR
QNDDGIGYIITVTNDKRTVEHKTLPNQPARSWLKPGVEVHAGEKLTEGSVDPKQLLEFAG
RSAVQDYILKEVKKVYQSGGIEISDKHLEVMIRQMMRKVMIVDGQDTGISPGVQINIERM
HDINENALLSGQLPARFRPVLMGISKASVETESFLSAASFQETTKVLTDAAIKSKVDPLS
GLKENVIIGKMIPAGTGYHGHRESTVRIHELAAELKEMREERNIQEEEASSILQEIVRG
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaacaattttgcctcgattcaactagcacttgcttcaccagaaagaatcttt
gaatggtcttatggtgaagttaagaagcctgaaacgattaattaccgttctcaaaaacca
gaacgtgacggacttttctgcgagcgtatttttggtccaacaaaggactgggaatgttat
tgtggaaaatataagaaagtacgttaccgcggtgtcgtttgtgatcgctgtggtgttgaa
gtaacaaaagcatccgtacgtcgtgaacgtatgggacatatcgaattagcagcacctgtt
gcacatatttggtatctacgtggtattccatcacgtatgagtttattactcaacattaca
ccaaagaatttggaagaagttgtatactttgttaagtgggttgttacagatccacgcgat
acaaatctagaatacaaacaaatcctcaatgaaaaagaataccgtgattatcaacaagaa
ttcggttatgtttcatttgaagcacaaaccggagccgaagcgattcgtacgcttctagcg
caagcagatttagatgctgaacatcaagatattatggctcagcttgaatccgcaaaaggt
gacaaacgccgtcgattgattcgtcgtttggaaactgttgaagccttcattaattcagat
aacaagcctgagtggatggtactttcagtattaccagttattccaccagacttgcgtcca
atgcttcaacttgatgggggtcgtttcgctgcatctgacttgaatgacctttatcgccgt
gttattacacgtaacaaccgtcttaagaaattacttgagatgggaacacctgcaatcatt
gttcaaaacgaaaaacgtatgttacaagaagctgtagatgctttgattgacaacggacgt
cgttcaaaaccagttacaggtgcaggtggtcgtccattaaaatcactctcacacaactta
aaagggaaacaaggtcgtttccgtcaaaacttactgggtaagcgtgttgacttctcaggt
cgttctgttatcgcagttggaccagacttgaagatgtatgaatgtggtattcctaaagaa
atggcaatcaatctctttaaaccatttgttgtaaatgaaatgaagattcgtggcatcagc
aacaatgcgaaagccgctgaaaaattgatcgaacgccaagatcctcgtgtgtgggatgtt
gtggaagatgtcattagagatcatccagtactgttaaaccgtgcgccaacacttcaccgt
cttgggatccaagcgtttaaaccaaaactaattgaaggacgtgcgattcgtcttcacccg
cttgtaacacctgcgtttaacgcggactttgatggtgaccaaatggcggttcacgtgcct
ctatcagaaatggctcaagcagaagctgaaattctaatgcttggttcacataatatcctt
ggacctaaagatggtaaaccaatcgttacaccatcacaggatatggttttaggtaacttc
tatctaacaatggaagaaacaaaagaagagttctttgaaaaagcagatgaacttgaatca
ttaggcgacttccaaggtgctgaaaaatggcgtaactttggtaataaccaaggtaaggcg
tttagaagtgttaacgaagcacgccttgcatatgaacaaggctttatccacttgcataca
cgtatctgcattcgtgctgcttccttgaacaaaggaaacttcagtgcaaaacaaaatgga
ctttatcttatcacaacacttggtaagttaatcttcaatgaaatgttcccatctgatttc
ccttacttgaatgaagtaaacaaagataactttaagacaactccagataagttctttgtg
caaatgggacaagatgtacctgaaattatcagtcaaatgcctttaaatgctgacttcaag
aaaaaagatcttgagatcattatcaaggaaatctttgatcgttattcaaccgataagact
tctgagattcttgaccaaattaaagatcttggattcttgtactcaacgcgtgcgggtatg
actgttgcgcttagtgacattaatgttgcccctaacaagcaaaaatacatcgatgaaggg
aaagaaaaagcagttcgcttgatgactcaattcgatcgtggtcttctcacacctcaagag
tgggaaggtaaattaatgcaactttgggatggcgttaaaaacgttgttggtagcgagttg
atgcaaaaccttgaacgtaaaaacccgattaatatgatggcgacttctggagcgcgtggt
aacgtttctaactttacgcagctcgcaggtatgcgtggtcttatggcacgtcctactcag
tctaagtcaaacaaaggattccaaccaagtattattgaggttccgatctattcttcattc
cgtgaaggtctaaacgtgagtgagttctttaactcaacccacggtgtgcgtaaagggatg
accgatactgcgcttaagactgcggaatctggatacttaacacgtcgtctggttgacgtt
gcgcaagacgtcatgattactgaagatgactgtggtgctgctgaaggttatgtagtagca
gaaattattgatcaaaaatcaaatacaatcattgaatcattgtatgatcgtttagtgggt
cgatatatcaaagaaacaatcgttgatccaaaaactaaagaagtgattatcgaagaagat
gaattcatcgatgaaattattgcacgtcgtattgtgaactctggaataaaagaagtgtcc
attcgtaacgtgtttacctgtgaagcgaaacacggtatctgtgcgaaatgttacggtcgt
aacatggctacaggtcaagtggttgaaggtggagaagctgtgggtattatggcggctcaa
tcaatcggggaaccaggtacacagctaacaatgcgtacattccataccggaggggttgcg
acagctggtggggaagatatcactcaaggtcttccacgtgttgaggaacttttcgaagca
cgtactccaaaacttgctgcaatcatttctgaaatcacaggtgaagtaactgatattcgt
caaaatgatgacggtattggctacattattaccgtaacaaacgacaaacgtaccgttgaa
cacaaaacacttccaaatcaaccagctcgttcatggttgaaaccaggtgttgaagtgcat
gcgggtgagaaactcactgaaggatctgttgatccaaaacaacttcttgaatttgcaggt
cgttctgcagtacaagattacatcttgaaagaagttaagaaagtataccaaagcggtggt
attgaaatctctgataagcaccttgaggtaatgattcgtcaaatgatgcgtaaagttatg
atcgttgatggccaagacacaggcattagcccaggtgttcaaatcaacatcgaacgtatg
catgacattaacgaaaatgcactactttctggacaattacctgcacgtttccgtcctgta
ttaatgggtatttcgaaagcgtctgttgaaactgaatcattcctatctgctgcatcattc
caagaaacgactaaagttcttacggatgctgcgattaagtcaaaagtggatccactttca
ggcttgaaggaaaatgttatcattggtaagatgattcctgcgggaacgggttaccatggt
cacagagaatcaacagttcgtattcatgaacttgcagctgaactgaaggaaatgcgtgaa
gaacgtaacatccaagaagaagaagcaagctcaattctacaagaaatcgtacgcggttaa
DBGET
integrated database retrieval system
