Erysipelothrix larvae: AOC36_01115
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Entry
AOC36_01115 CDS
T04263
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
erl
Erysipelothrix larvae
Pathway
erl03420
Nucleotide excision repair
erl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
erl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOC36_01115
03430 Mismatch repair
AOC36_01115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erl03400
]
AOC36_01115
Enzymes [BR:
erl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOC36_01115
DNA repair and recombination proteins [BR:
erl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOC36_01115
MMR (mismatch excision repair)
Other MMR factors
AOC36_01115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DUF5677
PcrA_UvrD_tudor
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AMC92642
UniProt:
A0A109UGH6
LinkDB
All DBs
Position
226481..228613
Genome browser
AA seq
710 aa
AA seq
DB search
MEYINGLNEQQKEAVLTPYKHVRVIAGAGSGKTRVLTTRIVHLVKTVGISPRKICAITFT
NKAANEMKARLQDMLKDESGVNTSTIHALCVRIIREEFEALGLVRNFTILDSTDQQSILK
EAYRQFGYERKALKYGRVLGYISNNKVAGISPDQAHAMSYGSYEDGCMAKVYEFYQTQLK
EMFALDFDDLLLQVNHLFKTNETVKQRWQRRFNVILVDEFQDVDHIQYSIIDSLVGDENE
LYVVGDPDQTIYTWRGANMDFIVGFNKHYPDSITITLNQNYRSTQKILDCANQLINWNTN
RVKKDLIANFESDEPVIYGHQDDEEMESYWIAKKMRMLHEEGHSYLDMAVLYRSNYLSRS
IEKTLVNMGIPYVVYGGLRFYDRAEIKDMMSYLRMITHGDDLALRRSIVTPRRKIGEKTL
NKIADEAKENGRTMYEHMCYLEAIGEAKANIAGFVRLIEDLRAYYILYPSIDRLMQRILE
DSGLRKMYEKDEEIERLESIKELMGDAISFQESNPSASLESYVQMVSLYGDKDSVLEGEF
VRLMTVHAAKGLEFDTVFIMGLNDDVFPNRTSVIEGKEGIQEERRLAYVAVTRAKKRLFL
SSNQGFSYVMGRGNRPSRFIKEMENPSLVHETKRAAPRQSTPQFETRQSELITRAKNNYR
PGDLIVHDEFGEGIVISIDEDTVKIAFKFPFGTKTISRMFAGIRLKGVLT
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtggaatatattaacggtcttaatgaacaacaaaaagaagcggttttaacgccgtataaa
catgtgcgcgtaattgctggggcgggaagtggcaagacgcgtgttttaacgacgcgtata
gtacatttggtgaaaactgttggtataagtccacgtaaaatatgtgcgattacatttaca
aacaaagcggccaatgaaatgaaggcacgccttcaagatatgttgaaggatgaatccggt
gtaaatacctctacgattcatgcattatgcgtgcgtattattcgtgaagagtttgaagca
ttaggcctagtgcgaaactttacaattctggattctacagaccaacagtccatcttaaaa
gaagcgtaccgtcaatttggttatgagcgaaaagcattgaagtatggtcgcgtgttggga
tatatttcaaataataaagtagcggggatttctcccgatcaagcccatgcgatgtcctat
gggtcttatgaagatggatgcatggccaaggtgtatgagttttatcaaacacagcttaag
gaaatgtttgcgttggattttgacgatttattgctgcaggtgaatcatttgtttaaaaca
aacgaaacagtcaaacaacggtggcaacgccggtttaatgtcattttagtggatgagttt
caagacgttgatcacattcaatatagtattattgactcacttgtgggtgatgagaatgag
ttatatgtcgtcggggatccagatcaaaccatctatacatggcgtggtgcgaacatggat
tttattgttggttttaacaagcactatcccgattccataacgattacgctgaatcaaaat
tatcgttcaacacaaaagattttggattgtgcgaatcagttaattaattggaatacaaat
cgcgtgaaaaaagatttaattgcgaactttgagtcggatgaaccggtaatctatggtcat
caggatgatgaagaaatggaaagttattggattgcgaagaaaatgcggatgcttcatgaa
gaagggcattcttatttggatatggcggtgttataccgttcgaactatttgtctcgaagc
attgaaaagaccttggttaatatggggattccctatgttgtgtatggtggactccgattc
tatgatcgtgctgagattaaagatatgatgagttacttacggatgattacccatggtgat
gatttagcgctgcgtcgcagtatcgtaaccccacgtcgtaagataggggaaaaaacattg
aataagattgcggatgaagcaaaagaaaatgggcgtacgatgtatgaacatatgtgttat
ttggaggcaattggtgaagctaaggcaaatatcgcagggtttgtgcgattgattgaagat
ttaagagcgtattatatcctctatccttcaattgaccgtctgatgcaacgcattcttgag
gacagtgggcttcgcaagatgtatgaaaaagatgaagaaattgagcgtttagaaagcatt
aaggaattgatgggagatgccatctcttttcaagaatcaaacccaagtgcttcgcttgaa
agttatgtgcagatggtatcgttatatggtgataaagactctgtacttgagggtgagttt
gtgcgtttaatgaccgtccatgcagcaaaaggactggagtttgatactgtttttattatg
ggactcaatgatgatgtatttcctaatcgtaccagtgttattgaagggaaagagggaata
caagaagaacgtcgtttagcgtatgtggcagtaacccgtgccaaaaaacggttgttttta
tccagtaatcaaggatttagttatgtcatgggacggggaaatcgaccgtctcggtttatt
aaagaaatggaaaatccaagccttgtccatgagacaaaacgggctgcaccacgtcaaagc
acacctcagtttgaaacccgtcaaagtgaactgattacccgtgcaaagaacaattatcga
ccgggtgatttaattgtgcatgatgagtttggtgaagggattgtgattagtattgatgag
gatacggttaaaattgcgtttaagtttccctttgggaccaagaccatatccagaatgttt
gcagggatacgattaaaaggagtcttaacatga
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