Erysipelothrix larvae: AOC36_05695
Help
Entry
AOC36_05695 CDS
T04263
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
erl
Erysipelothrix larvae
Pathway
erl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOC36_05695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erl03019
]
AOC36_05695
Messenger RNA biogenesis [BR:
erl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AOC36_05695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
RFamide_26RFa
KH_KhpA-B
KH_2
LBP_BPI_CETP
Motif
Other DBs
NCBI-ProteinID:
AMC93489
UniProt:
A0A0X8GZU9
LinkDB
All DBs
Position
complement(1228931..1230487)
Genome browser
AA seq
518 aa
AA seq
DB search
MPKELLIGILSALIVLVVTIVITIVMDRLGLNRARMEARNLMNEAQTKADNHVRQATLEA
KTQAYEIKLNAEKELKVQRKELQDFENKLGRREDNLSFKDANLVEKEKEISKKQRELESK
KASLDKMESVLQERIDVQLAELERVSNMSVDAAKAELFDVVEKQMENETLAYIKEQEEQA
HLRAEEISRNIISLAISRYSQDEVVHNTSSVISLPNEEMKGRIIGREGRNIRAFEQATGV
DLIIDDTPEVITVSCFDPIRREIAKLSLETLVQDGRIQPGRIEEVVEKVRKDLNQVILKT
GQDTLFELGIGKVDKELVAVLGRLKYRYSYGQNALSHSVEVAHLAGMMAAELGLSQKLAK
RAGLFHDIGKGLDFEMEGSHVELGVRLAKKCKEHPVVINAIASHHGDTEATSAISVLVAA
ADALSAARPGARFESFENYIQRLEDLEAIASTKEGVQRVFAISAGRELRVMVVPNEVDDL
QTTKLAREIREEIEEQLTYPGQIKVTVIRELRAQELAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagaattattgattggcatcttatccgcattgatagtattagtcgttacaatc
gtaattacaattgtaatggatagacttggattaaatcgtgcacgtatggaagcacgtaac
ctaatgaacgaagcacagacaaaagctgataaccatgttcgccaagctactttagaagcg
aagacacaggcttatgagattaaactgaatgcagaaaaagaacttaaagttcaacgaaaa
gaactacaagattttgaaaataaacttgggagacgtgaagataacctgagttttaaagat
gcaaatctagttgaaaaagaaaaagaaattagtaaaaaacaacgtgaattagagtccaag
aaagcttcattggataagatggagagtgtacttcaagaaagaattgatgtacaacttgca
gaattagaacgcgtatcaaatatgtcagtagacgctgcaaaagcagaattgtttgatgtc
gtagaaaagcaaatggaaaatgaaacattagcttatattaaagaacaagaagaacaagcg
cacttacgtgcagaagaaatatctcgtaatattatttcgcttgcgatttctcgttactca
caagatgaagtagtccataatacatcatccgtgatttcgttaccaaatgaagaaatgaag
ggtcggatcattggtcgtgaaggccgaaatattcgtgcctttgaacaagccacaggtgtt
gatttaattattgatgatactcctgaagtaattactgtatcctgttttgatccaattcgt
cgtgagattgcgaagctttcacttgaaacattagttcaagatggaagaattcaacccgga
cgtattgaagaagttgttgaaaaagttcgtaaagacctaaatcaagtaattctaaaaaca
ggacaagacacactctttgaattaggaattggtaaagttgataaagaattagttgccgta
ttagggcgattgaaataccgttattcgtatggtcaaaatgcgctttcgcattcagttgaa
gttgcccaccttgcggggatgatggcagctgagcttgggttaagccaaaagcttgcgaaa
cgagcaggacttttccatgatattggtaaaggacttgactttgaaatggaaggaagccat
gtcgaacttggtgttcgtcttgcgaaaaaatgtaaagaacaccctgtggttatcaatgcg
attgcatcacaccacggtgatacagaagcaactagcgcaatttctgtgcttgtagctgct
gcggatgcactaagtgctgcaagacctggtgcacgatttgaatcctttgaaaactatatt
caacgtcttgaagatcttgaagcaatcgcaagcaccaaagaaggtgttcaacgcgtattc
gcaatttcagctggacgtgaacttcgtgttatggttgttccaaacgaagtcgatgattta
caaacaacaaaacttgcacgagaaattcgtgaagaaatcgaagaacaattgacataccca
ggtcaaatcaaagttactgtgattcgtgaattacgagcacaggaactcgcaaaataa
DBGET
integrated database retrieval system
