Thomasclavelia ramosa: EYR00_02825
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Entry
EYR00_02825 CDS
T06753
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
erm
Thomasclavelia ramosa
Brite
KEGG Orthology (KO) [BR:
erm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erm03009
]
EYR00_02825
Enzymes [BR:
erm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EYR00_02825
Ribosome biogenesis [BR:
erm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EYR00_02825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SURNod19
BBS7_CtH
Motif
Other DBs
NCBI-ProteinID:
QMW73686
LinkDB
All DBs
Position
585778..586485
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AA seq
235 aa
AA seq
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MEVSRIKDLYYVLMKNKLGNHKICKTLIRHGEIRVNDQVITDVRYPVKADDIIMYHHIQL
NAQPFVYYMMNKPADYLCANHDKYHQCVIDLIGREDCYCLGRLDIDTTGLLIITNDTSLS
KKLLLPQNHVNKKYYVTTKFPLKDELIKKFFDGVVIDHKVQCLPSLLEILDEYHCLVTIN
EGRYHQIKKMFKSCQNEVCTLKRIAFAGIELDQKLALGEYRDLTSTELITLFKHC
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgagtcgaattaaagatctatattatgttttaatgaagaataaactagggaat
cacaagatatgtaaaaccttgattaggcatggggaaattagggtgaacgatcaagtaatt
acagatgttcgttatccagtaaaggcggatgatattattatgtatcatcatattcaatta
aatgcccagccatttgtttattatatgatgaataaaccggctgactatctttgtgcaaat
catgataaatatcatcagtgtgtaattgatctgattgggcgagaagattgctattgttta
gggcgtttagatattgatacaacagggctattgataattactaatgacacttcactatca
aaaaaattattattaccacaaaatcatgttaataaaaaatattatgtgactactaaattt
ccgcttaaagatgaattgattaaaaaattctttgatggtgtagtgattgatcacaaggtt
caatgtttacctagtttattggaaatacttgatgaataccattgtttagtaactatcaat
gaggggaggtatcatcaaattaaaaaaatgtttaaatcatgtcaaaatgaagtgtgtaca
cttaaacgaattgcttttgcaggtatagaacttgatcaaaaattagctttaggggaatat
cgagacttgacctcaacagaattgataactttgtttaagcattgttag
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