Thomasclavelia ramosa: EYR00_03575
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Entry
EYR00_03575 CDS
T06753
Name
(GenBank) response regulator transcription factor
KO
K20488
two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
Organism
erm
Thomasclavelia ramosa
Pathway
erm02020
Two-component system
erm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
erm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EYR00_03575
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EYR00_03575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
erm02022
]
EYR00_03575
Two-component system [BR:
erm02022
]
OmpR family
NisK-NisR (lantibiotic biosynthesis)
EYR00_03575
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
QMW73826
LinkDB
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Position
745439..746110
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AA seq
223 aa
AA seq
DB search
MYKILMIDDERDILEMLALQFQSEGYLVYLANDANEALKQLSVLPDLILLDINMPEMNGL
ELCTMIREHVNCPIIFLTARISSRDMINGLMLGGDDYITKPFSMDELFARVQAHLRREKR
SSHKSRGHFTRELIIDYSQRTVIIKNKKIDFSNKEFEIIKLLSMNAGQIFDREKIYEVVW
GFEANGDSAVIKEHIRKIRMKLSRYSENEYLETVWGVGYRWKK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtataagattcttatgattgatgatgaaagagacattttagaaatgctggcattacaa
tttcaatctgaaggatatttagtttatttagctaatgatgctaatgaagctttaaaacaa
ttatcagttttacctgaccttattttattagatatcaatatgccggagatgaatggttta
gaattatgtacgatgattcgggaacatgtgaattgcccgattatatttttaacagcacga
atttctagtcgggatatgatcaatggtttaatgctgggaggcgatgattatattacaaaa
ccattttcgatggatgaacttttcgcaagagttcaagctcatttacgtcgtgaaaaacgc
agctcccataaatcacgaggacattttactagggaactgattattgattatagtcaaaga
accgtaattattaaaaataaaaaaattgatttttctaataaggagtttgaaattattaaa
ttattatctatgaatgctggtcaaatatttgatcgtgaaaaaatttatgaagtagtatgg
ggctttgaagctaatggtgatagtgctgtaattaaagaacatattcgtaaaatccgaatg
aaattatcccggtatagtgaaaatgaatacttagaaacagtgtggggcgtagggtatcga
tggaaaaaataa
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