Thomasclavelia ramosa: EYR00_04910
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Entry
EYR00_04910 CDS
T06753
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
erm
Thomasclavelia ramosa
Pathway
erm03030
DNA replication
erm03410
Base excision repair
erm03420
Nucleotide excision repair
erm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EYR00_04910 (polA)
03410 Base excision repair
EYR00_04910 (polA)
03420 Nucleotide excision repair
EYR00_04910 (polA)
03440 Homologous recombination
EYR00_04910 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erm03032
]
EYR00_04910 (polA)
03400 DNA repair and recombination proteins [BR:
erm03400
]
EYR00_04910 (polA)
Enzymes [BR:
erm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EYR00_04910 (polA)
DNA replication proteins [BR:
erm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EYR00_04910 (polA)
DNA repair and recombination proteins [BR:
erm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EYR00_04910 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EYR00_04910 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
DNA_pol_A_exo1
MdcG
Motif
Other DBs
NCBI-ProteinID:
QMW74074
LinkDB
All DBs
Position
1031686..1034298
Genome browser
AA seq
870 aa
AA seq
DB search
MKELVMIDGNSLLYRAYYATAAMGNLMVNKDGVPTNAVYGFANMLESILKGNPEYLVVAF
DYGKKTFRNDLFEVYKGTRSATPDELACQFSMIREYLTAHGIRYQEIEGYEGDDIIGTVA
VKASKQRFKVSIVTSDKDMLQLVDDNISVYLTKKGVGELEKITPAKFKEIYGLIPDQMRD
LKGLMGDKSDNIPGIPGVGEKTALKLLKEYHTVENLSEHLDDLKGKMGEKIRDNIDQGLL
SKRIATIIKDVPMEIDLEEYRYQGHDYNELAEFYRRYSMNSLLKRMSLNNEEVQAEKAVD
VKIVTQLPIIKRDSSLVVGVYDTNYHRSMIVGFAVYNDSEAYFIGTEDALNCTNFKNFIS
DKKIEKYGYDIKKSINAAKWHGLEIENYVFDLQLASYILNPSLKDEIRSVCEYYEYYDVF
YDEEVYGKGAKKKVPETSRVAEHLIKQAKAIYILKDQAIEKLNNENQFELYKDVEMPVAK
ILARMEFQGAKVDSVVLKQLEEQFGREINILEKEIHTLANREFNIASPKQLGEVLFEDLG
LPNGKKTKTGYSTSVDILNKLKDIHPIIDKVLKYRTLSKLYSTYIIGLQDQVFIDGKIHT
IYNQALTQTGRLSSTDPNLQNIPVKTPEGKLIRKAFVPEYDYLVSFDYSQIELRVLAHLA
GVKSLIKAFNEDKDIHRHTASEIFRVPEEQVDSTMRRNAKAVNFGIIYGMSDFGLAEQVG
VSVGEAREFIKRYFENYPEIKLYMDSNIDFCKKNGYVTTMLNRKRFIREINEKNYMRQEF
GKRLAMNSPIQGSAADIIKVAMIKVDELLKKHQLKSKMILQVHDELIFDVYQEELQEVME
IVAKGMTTAIKMDVELKAEGSYAVNWYELK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagtaatgattgatggaaactcgttgttgtaccgtgcttattatgcaacg
gcagcaatgggaaatttaatggtaaataaagatggtgttcctactaatgcagtgtatgga
tttgccaatatgttagaaagtattttaaagggtaatcctgagtatttagttgttgccttt
gattacggtaaaaaaacttttagaaatgatttatttgaagtttataaaggaactcgtagc
gccactcctgatgaattagcttgtcagttttcaatgattcgtgaatatttaacagctcat
ggaattcgttatcaggaaatcgaagggtatgaaggcgatgatattattggaactgttgct
gttaaagcaagcaaacaacgttttaaagtaagtattgttacaagtgataaagacatgctc
caattagttgatgataatattagtgtttatcttactaagaagggggtaggagaattagaa
aaaatcacccctgctaaatttaaagaaatatatggtttgattcctgatcaaatgcgcgat
ttaaaaggattgatgggtgataaatctgataatattccagggattcccggagttggagaa
aaaacagctttaaaattactaaaggaatatcatacagttgagaatttaagcgaacatctt
gatgatttaaaaggaaagatgggtgaaaaaattcgtgataatattgatcagggattgtta
tcaaagcgaattgcaacaattattaaagatgtgccgatggaaatcgatttagaagaatat
cgttatcaaggacatgattataatgagttagctgaattctaccgacgttacagcatgaat
tcattattaaaaagaatgtctttgaataatgaggaggttcaggctgaaaaagcagtcgat
gttaaaatcgtaactcaattaccaattattaagcgtgatagttcattggttgtaggtgtg
tatgatacaaattatcatcggtcaatgatcgttggatttgcagtttataacgatagtgaa
gcttatttcattggaactgaggatgccttaaattgtactaattttaaaaattttattagt
gataagaaaattgaaaaatatggttatgatattaaaaagagtattaatgcagcaaaatgg
catggccttgaaatagaaaattatgtttttgatcttcaattagcttcttatatattgaat
ccaagtttaaaagatgagattcgcagtgtttgtgagtattatgagtattacgatgttttt
tatgatgaagaagtatatggaaagggtgcaaagaagaaggttcctgaaacatcaagagta
gcagagcatttaattaaacaggcaaaagctatttatattttaaaggatcaggcaattgaa
aaattgaataatgaaaatcaatttgaattatataaagatgttgaaatgccagttgcaaaa
attttagcacgtatggagtttcaaggggcaaaagttgattctgttgttttaaaacaacta
gaggaacaattcggtcgtgaaattaatattttagaaaaagagattcatacgcttgctaat
agagagtttaatatcgcatcacctaaacagttgggagaagttttattcgaggatttaggt
ttgcctaatggtaagaaaacgaaaacaggatattctacatcagtagatattttgaataaa
ctaaaagatatacatccgattattgataaagtcttaaagtatcgaacgctttctaaatta
tattctacatatattataggattacaagatcaagtttttatagatgggaagattcataca
atctataatcaggcgttgacgcaaacaggaaggttatcatcaaccgatcctaacctgcaa
aatatacctgttaaaacaccagaaggaaaactcattcgtaaagcttttgttccggaatat
gattatttagtatcttttgattattcacaaattgaacttagagtcttggctcatttagcg
ggtgttaaatcattgatcaaagcttttaacgaagataaagatattcatcgccatactgct
agtgaaatatttagagtacctgaagaacaagttgatagtacgatgcgacgtaatgctaag
gctgtaaactttggaattatttatggaatgtctgattttggtttggcagaacaagttgga
gtaagcgtaggggaagcgcgtgaatttatcaagcgttattttgaaaactatcctgagata
aaattatatatggatagtaatattgatttttgtaagaaaaatggttatgttacaacgatg
ctgaatcggaaacgttttattcgtgaaattaatgaaaaaaattatatgcgtcaagagttt
ggaaaacgattagcaatgaattcaccaatacaaggatcggcagctgatattattaaggtt
gcaatgatcaaagttgatgagctattgaagaaacaccaattaaaatctaagatgatctta
caagtacacgatgaattgatctttgatgtttatcaagaagaattacaagaagttatggaa
attgttgctaaaggaatgacgactgcaattaagatggatgttgaattaaaagcagaagga
agttatgccgttaattggtatgaacttaaatag
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