Thomasclavelia ramosa: EYR00_07450
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Entry
EYR00_07450 CDS
T06753
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
erm
Thomasclavelia ramosa
Brite
KEGG Orthology (KO) [BR:
erm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erm03009
]
EYR00_07450
Enzymes [BR:
erm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EYR00_07450
Ribosome biogenesis [BR:
erm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EYR00_07450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6128
Motif
Other DBs
NCBI-ProteinID:
QMW74544
LinkDB
All DBs
Position
1566012..1566731
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AA seq
239 aa
AA seq
DB search
MVMRLDKLLANYGIGTRKEVKSLIRKGFVKVNGMIIKKDDFKVDHEIDEIVFDDELIEYR
PYVYIMLNKPAGYISATKDNLHPTVLELIEGYENYDLFPVGRLDLDTEGLLLITNDGDFS
HKLLAPSRNHSKIYFANIAGVMDEQDIQAFKDGIILNTGYHCKPANLEIINKNNDSCDVR
IEIFEGKFHQVKKMVEVCGKEVIYLKRLSIRNLELDRSLSLGDFRELSNEELVDLMEDL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgcgacttgataaattgcttgcaaactatgggattggtactagaaaagaagta
aaatcactgattcgaaaaggttttgtaaaagtaaatggaatgattataaagaaagatgat
tttaaagttgatcatgaaattgatgaaatagtatttgatgatgagttgattgaataccgg
ccatatgtctatataatgctgaataagccagcgggatatattagtgcaactaaagacaat
cttcatcctacagtattagaactgattgagggctatgaaaattatgatttatttcctgtc
ggccgcttggatttagatacagaaggactattgttaattactaatgatggtgattttagt
cataaattattagcccctagtcgaaatcattcaaaaatatattttgcaaatattgcggga
gttatggatgaacaagatattcaggcatttaaagatgggattattttaaatactggctat
cactgtaaacctgccaacctagaaattattaataaaaacaatgatagttgtgatgttaga
attgaaatatttgaaggaaagtttcatcaagtaaaaaagatggttgaggtttgtggtaaa
gaggtaatatatttaaaacgcttatcgatccgcaatcttgaactggataggagtttatca
ttgggtgattttcgagaattatctaatgaggaattagtcgacttgatggaggatttatga
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