Thomasclavelia ramosa: EYR00_09405
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Entry
EYR00_09405 CDS
T06753
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
erm
Thomasclavelia ramosa
Pathway
erm03030
DNA replication
erm03430
Mismatch repair
erm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EYR00_09405 (holA)
03430 Mismatch repair
EYR00_09405 (holA)
03440 Homologous recombination
EYR00_09405 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erm03032
]
EYR00_09405 (holA)
03400 DNA repair and recombination proteins [BR:
erm03400
]
EYR00_09405 (holA)
Enzymes [BR:
erm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EYR00_09405 (holA)
DNA replication proteins [BR:
erm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EYR00_09405 (holA)
DNA repair and recombination proteins [BR:
erm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EYR00_09405 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QMW74894
LinkDB
All DBs
Position
complement(1933774..1934721)
Genome browser
AA seq
315 aa
AA seq
DB search
MIFVIYGEESFLMEQKLQSLKKEYDCNEDNMNISTYRANEDSLEEVYEDLITPPFLTDKK
MVVLKNPYFLTTKKVKKDNNELEYFEKCLINSEEVIFVIYHVGKDFDERKKIVKNLRKQA
QFFEIDKVNHYKLSDSTRQAIRRRDATIDDDALELLLSRLGDSLNNVALEVEKLCLYSKH
ITYDIVDELVSKPLDENVFALTSAILQKDRRKMFSIYHDLMILNEEPIKLIVLIAGQMRL
IYQVKLLDRKGYNDKEIGKILGVNPYRLKYVRQEGKDFDLNELLQCLDDLSRLDVEIKTG
KMDKKMGLELFMVRI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgtaatatatggtgaagaaagttttttgatggaacaaaaattacagtcttta
aaaaaagaatatgattgtaatgaggataatatgaatatttcaacatatcgggctaatgaa
gatagtttagaagaagtttatgaagatttgatcacacctccttttttaaccgacaagaaa
atggttgtgttgaaaaacccttattttttaacgacaaagaaagtaaaaaaagataataat
gagttagagtattttgaaaaatgtttaattaatagtgaagaagtaatatttgtaatttat
catgttggtaaagattttgatgagcgtaaaaaaattgttaaaaatttacgtaaacaagca
caattttttgaaatagataaagttaatcattataagctatcagacagtacacgtcaagca
atcagacgtcgagatgcaacgatcgatgatgatgcattagaattattattgagtcgttta
ggagatagtttgaataatgttgctcttgaggtggaaaaactatgtttgtacagcaaacat
attacatatgatattgttgatgaattggtaagtaagccgttggatgaaaatgtttttgca
ttaactagtgcgattcttcaaaaagatcgaagaaaaatgttttcgatttatcatgatcta
atgattttaaatgaggaaccaattaagttgattgttcttatagcgggtcaaatgcggcta
atttaccaagttaaattattggatcgtaaaggttataatgataaagaaattggaaaaata
ctgggagttaatccttaccgattaaaatatgttcgtcaagaaggaaaagattttgattta
aatgaattattgcaatgtttagatgatttatcacgtcttgatgtagaaatcaaaacaggt
aaaatggataaaaaaatgggtttagaattatttatggtaagaatttag
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