Thomasclavelia ramosa: EYR00_13185
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Entry
EYR00_13185 CDS
T06753
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
erm
Thomasclavelia ramosa
Pathway
erm00220
Arginine biosynthesis
erm00240
Pyrimidine metabolism
erm00250
Alanine, aspartate and glutamate metabolism
erm01100
Metabolic pathways
erm01110
Biosynthesis of secondary metabolites
erm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
erm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
EYR00_13185 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
EYR00_13185 (carB)
00220 Arginine biosynthesis
EYR00_13185 (carB)
Enzymes [BR:
erm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
EYR00_13185 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
ATP-grasp
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
GARS_A
ATP-grasp_5
ATP-grasp_2
DUF6079_1st
GTP_EFTU_D4
YopH_N
Motif
Other DBs
NCBI-ProteinID:
QMW75609
LinkDB
All DBs
Position
complement(2737384..2740602)
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AA seq
1072 aa
AA seq
DB search
MPKREDINTVLVIGSGPIIIGQACEFDYSGTQACKALRGLGYKIVLVNSNPATIMTDPET
ADVTYIEPLNVERLTQIIEKERPDALLPNLGGQSALNLCSELNEAGVLEKYNVQVLGVQV
DAIERGEDRLEFKKEMDKLGIEMARSEVSTTVEEALAIAERLGYPVVVRPAYTMGGAGGG
LVYNVEELKTVVSRGLQASLVGQCLIEESILGWEELEVEVVRDANNNMITVCFIENIDPL
GVHTGDSFCSAPMLTISQEVQDRLKDQAFRIVESIGVIGGTNVQFAHDPETDRIVVIEIN
PRTSRSSALASKATGFPIALVSAMLAAGLTMEDIPCGKYGTLDKYVPDGDYVVIKFARWA
FEKFKGAEDKLGTQMKAVGEVMSIGKTYKEAFQKAIRSLEIGRYGLGYAKNFNKLSKEEL
LHMLTVPTSERQFIMYEALRKGATVEELFELTQIKHYFIEQMKELVEEEENIKSYEGKEL
PAEVLKQAKQDGFSDKYLSQILNVEENVIREERLANNINQAWEPVHVSGTKDSAYYYSTY
NAEDNSDIHHDKKKIMILGGGPNRIGQGIEFDYCCVHAALALKKLGFETIIVNCNPETVS
TDYDTSDKLYFEPLTLEDVLSIHEKEKPVGVIAQFGGQTPLNLAAQLKKNGVNILGTTPE
TIDMAEDRDLFNAMMEKLEIPMPESGMAVNVEEALEIAKRIGYPLMVRPSYVLGGRGMEV
VYDDESLEQYMKAAVGVTPDRPILIDRFLNNAMECEADAISDGETVFVPAVMEHIELAGI
HSGDSACILPSKHIPIRHLETIKEYTKKIAKEMNVRGLMNMQYAIADDKVYVLEANPRAS
RTVPLVSKVCNINMVKIATDIVTRELTGRPSPVPTLTEKKIPHIGVKQAVFPFNMFPEVD
PVLGPEMRSTGEVLGIASSYGAALYKAEEGAKTILPTEGKVLISVSDLDKPEVVELAQGY
YDAGFTIVATGNTYNLIKESGIPVEKIKKIHEGRPNISDALTNGELAMIINTPHGKQSAH
DDSYIRKAAIKMRIPYMTNIAAAKASLEGIMEMKIHGSHEVKSLQEYHLAIK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagagaagatattaatacagtattagtaattggttcaggtccaattattatt
ggtcaagcttgtgaatttgattattcaggaactcaagcgtgtaaagctttaagagggtta
ggttataagatcgtgttagtgaactcaaatcctgcaacgatcatgacagatccggaaact
gctgatgttacttatattgaaccattaaatgtagaacgattaacacagatcattgaaaaa
gaaagaccagatgcgttacttcctaacttaggtgggcaatcagcattaaacttatgttct
gaattaaatgaggctggtgttttagaaaaatataacgttcaagtattaggagttcaagtt
gatgcgattgaacgtggtgaagaccgtttagaatttaaaaaagaaatggataaattaggc
attgaaatggctcgtagtgaggtttcaacaactgttgaagaagccttagcaattgctgaa
cggttaggttatccagtagttgtgcgccctgcttatactatgggtggtgccggtggtgga
ctggtatataacgttgaagaattaaaaacagttgtatctcgggggttacaagctagttta
gttggtcaatgtttaatcgaagaatctattttaggttgggaagaattagaagttgaagtt
gttcgtgatgctaacaacaacatgatcacagtatgtttcattgaaaatattgatccatta
ggagttcatactggagattcattctgtagcgctccaatgttaacaattagccaagaagtg
caagatcgtttaaaagaccaagcatttagaattgttgaatcaattggtgtaattggaggg
acaaatgttcaatttgctcatgatccagaaactgatcgaatcgttgttattgaaattaat
ccaagaacatctcgttcatcagctttagcatcaaaagcaacaggattcccaattgcttta
gtttcagcaatgttagcggctggtttgactatggaagatattccttgtggtaaatatgga
actttagataaatatgtacctgatggtgattatgttgtaatcaagtttgcacgttgggca
tttgaaaaattcaaaggggctgaagataaacttggtactcaaatgaaagctgttggggaa
gttatgagtatcggcaaaacttataaagaagctttccaaaaagcaattcgttcattggaa
attggacgttatggcttagggtatgctaaaaacttcaataagttatctaaagaagaatta
ttacatatgttaactgttccaactagcgaaagacaattcattatgtatgaagcgttaaga
aagggagcaacagttgaagaattatttgaactaacacaaatcaaacattacttcattgaa
caaatgaaagaattagttgaagaagaagaaaatataaaatcatacgaaggtaaagaatta
ccggctgaagtactaaaacaagcaaaacaagatggattctcagataaatatttaagtcaa
attttgaatgttgaggaaaatgtaattagagaagaaagattagctaataatattaatcaa
gcatgggaaccagtacacgtaagtggaacaaaggatagtgcttattattattcaacatat
aatgctgaagataatagcgacattcatcacgataaaaagaaaattatgattttaggtggt
ggacctaatcgtattggacaaggaattgaatttgactattgctgtgttcatgctgcttta
gcattaaagaaattaggatttgaaacaattattgttaactgtaaccctgaaactgtatca
actgactatgatacatctgataaattatactttgaaccactaacattagaagatgtttta
agtattcatgaaaaagaaaaaccagtaggtgtaattgcacaatttggtggacagacacca
cttaacttagctgctcaattaaagaaaaatggtgtgaatattttaggaacaacaccagaa
actattgatatggcagaagatcgtgacttatttaatgcaatgatggaaaaattagaaatt
ccaatgcctgaatctggaatggcagtaaatgttgaagaagcattagaaattgctaaaaga
atcggctatccattaatggtaagaccttcttatgttttaggtggtcgtggaatggaagtt
gtttatgatgatgaaagtcttgaacaatatatgaaagcagctgttggggtaactcctgat
cgcccaatcttaatcgaccgtttcttaaataatgctatggaatgtgaagctgatgcaatc
agtgacggtgaaactgtttttgttcctgcggttatggaacatatcgaattagctggtatc
cactcaggtgattcagcatgtatcttaccctctaaacatattcctatccgtcatttagaa
acaattaaagaatatacaaagaaaattgctaaagaaatgaatgttcgtggtttaatgaat
atgcaatatgcaattgctgatgataaagtatatgtattagaagccaatccaagagcttca
agaacagtaccactagtttcaaaggtatgtaatattaatatggtaaaaattgcgacagat
attgttactcgtgaattgactgggcgtccttcaccagtaccaactttaacagaaaagaaa
attcctcatattggagttaaacaagcagttttcccattcaatatgttcccggaagtagat
cctgttttaggacctgaaatgcgttcaactggagaggtattaggaattgccagttcatat
ggagcagctttatataaagctgaagaaggggcgaaaacaattttaccaactgaaggaaaa
gttttgatcagtgttagtgacttagacaaaccagaagttgttgagcttgcacaaggatat
tatgatgctggatttactattgtagcaacagggaatacttataacttgatcaaagaaagt
ggtattccagtagaaaaaatcaaaaaaattcatgaaggtcgtccaaatattagtgatgct
ttaactaatggtgaattagcaatgatcattaatacacctcatggtaaacaaagtgctcat
gatgatagttatattcgtaaagctgcaattaaaatgagaattccatatatgactaatatt
gctgctgctaaagcatcattagaaggaattatggaaatgaaaattcatggtagtcatgaa
gttaaatctttacaagagtatcatttagcaattaaataa
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