Thomasclavelia ramosa: EYR00_13790
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Entry
EYR00_13790 CDS
T06753
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
erm
Thomasclavelia ramosa
Brite
KEGG Orthology (KO) [BR:
erm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erm03016
]
EYR00_13790 (truA)
Enzymes [BR:
erm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EYR00_13790 (truA)
Transfer RNA biogenesis [BR:
erm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EYR00_13790 (truA)
Prokaryotic type
EYR00_13790 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
RET_CLD3
Smr
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QMW75729
LinkDB
All DBs
Position
complement(2886596..2887333)
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AA seq
245 aa
AA seq
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MVRVKCSVSYDGSKFHGFQVQNKLRTVQGEIQKALKNICKEEIIIHGSGRTDAKVHGTKQ
VFHFDTTREMPEAQWKRAINHFLPNDIYILDSYFVDENFHSRYSAIKKEYHYLLSTKEYS
PFETNYIFQYGRPLDLELMREAAKIFIGEHDFASFCSYDQYGNTIRELYELSITNEKGII
KFILVGNGFRRYMVRHIVGGLIQVGAKRVTKERLQELLDSKGEQKCLFKAKPQGLYLHEV
FYDEN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggttagggttaaatgtagtgtaagctatgacggaagtaaatttcatggctttcaagtg
caaaataaattacgaacagtacagggcgagatccaaaaggcattaaaaaatatatgcaaa
gaagagattattattcatggttcaggaagaaccgatgcaaaggttcatggaactaaacaa
gtttttcattttgatactacaagagaaatgcctgaagcgcagtggaaacgggcaattaat
cattttttaccaaatgatatatatatcttagattcatactttgttgatgagaattttcat
agtcgttatagtgcaataaaaaaagaatatcattatttattaagtacaaaagaatatagt
ccatttgaaacgaattatatttttcaatatggacgaccattagatttagaattgatgaga
gaagcagctaaaatatttattggtgagcatgattttgcatcattttgtagctatgatcag
tatggtaatacaattagagaactatatgagttgtcgattactaatgaaaaggggattatt
aaatttattttagttggaaatggatttagacgttatatggttcggcatatcgttggtgga
ctaattcaagttggggcaaaacgggttactaaagaacgattacaagagttattagatagc
aaaggtgaacagaagtgtttgtttaaggctaagccccagggactatacttacatgaggtg
ttttatgatgaaaactaa
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