Enterobacter roggenkampii DSM 16690: BFV67_03930
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Entry
BFV67_03930 CDS
T05556
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ern
Enterobacter roggenkampii DSM 16690
Pathway
ern03030
DNA replication
ern03430
Mismatch repair
ern03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ern00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFV67_03930
03430 Mismatch repair
BFV67_03930
03440 Homologous recombination
BFV67_03930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ern03032
]
BFV67_03930
03400 DNA repair and recombination proteins [BR:
ern03400
]
BFV67_03930
Enzymes [BR:
ern01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFV67_03930
DNA replication proteins [BR:
ern03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFV67_03930
DNA repair and recombination proteins [BR:
ern03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFV67_03930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOP94368
UniProt:
A0A167PWJ4
LinkDB
All DBs
Position
860560..864042
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GMKPIVGADFHVQSDLIGDELTQISVLAMNNTGYQNLTLLISKAYQRGYGALGPWIDRDW
LAELNEGLLLISGGRMGDVGKSLLRGNSALVDQCVSFYEEYFPNRYYLELIRTGRQDEES
YLHAAVALAEERGLPVVATNDVRFLEAGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYIKEIERYVGGHRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggcgaagaccgggccgctggtaaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggcctggtgaagttctacggaacggcgcacggcgcg
gggatgaagccgatcgtcggcgcagattttcatgtgcagagcgacctcatcggggatgaa
ctgacgcaaatctccgtgctggcgatgaacaacacgggttaccaaaacctcacgctgctg
atctccaaagcctatcagcgcggttacggcgcgctgggcccgtggatcgaccgcgactgg
ctggctgaactgaacgaagggctgctcctgatctcaggcggccggatgggggacgtcggc
aaatccctgctgcgcggtaacagcgcgctggtggatcaatgcgtctcgttctatgaagaa
tatttcccgaatcgttattacctggagttgatccgtaccggccgtcaggatgaagagagc
tatcttcatgccgcggtggcgctcgcagaagagcgcgggttgcccgtagtggccaccaac
gacgtgcggttccttgaggcgggcgattttgacgctcacgaaattcgcgtggcgatccac
gatggctttaccctcgacgatccgaagcggccgcgtaattactccgctcaacagtacatg
cgcagcgaggaggagatgtgtgagctcttctccgatatccccgaagcgctggaaaacagc
gtagagattgccaagcgctgcaacgtcaccgtccgccttggcgaatacttcctgccgcag
ttcccgacgggtgacatgaccacggaagatttcctggtcatgaaatcgaaagaaggtctg
gaagagcgtctggaattcctgttcccggatgaagaagagcgtaaaaagcgtcgtccggag
tatgacgaacgcctggacattgaactccaggtgatcaaccagatgggcttcccgggctac
ttcctgatcgttatggagttcatccagtggtcgaaggataacggcgtgccggttggaccg
ggccgtggttccggcgcaggctcgctggtggcgtacgcgctgaaaattaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttcctcaacccggaacgtgtctcgatgccc
gacttcgacgttgacttctgcatggagaaacgtgaccaggtgatcgagcacgtggccgat
atgtacggccgtgatgcggtatcgcagatcattaccttcggtacgatggcggcgaaagcg
gttatccgcgacgtgggccgcgtgctgggccacccgtacgggtttgtcgatcgcatctct
aaactggtgccgcccgatccgggcatgacgctggcaaaagcctttgaggctgaaccgcag
ctgccggaaatctatgaagcggacgaagaggtcaaagcgctgatcgacatggcgcgcaag
ctggaaggcgtcacgcgtaacgccggtaagcatgcggggggcgtggttatcgccccgacc
aaaatcaccgacttcgcgccgctgtattgcgatgaagcgggccagcatccggtcacccag
ttcgacaagaacgacgtagaatacgccgggctggtgaagttcgacttccttggcctgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacgcccgccgcgagaagaacggc
gagccgccgctggatatcgcggccatcccgctggacgacaagaaaagtttcgacatgctg
cagcgctcggagaccaccgccgtcttccagcttgaatcccgcggcatgaaagatctgatt
aaacgtctgcagcccgactgcttcgaagatatgatcgcactggtggctctgttccgtccg
ggccctttgcagtcagggatggtagataactttatcgaccgtaagcacgggcgcgaagag
atttcctacccggacgttcagtggcagcacgaaagcctgaagccggtactggagccaacc
tatggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtgctttccggctat
acgctcggcggcgcggacatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgttccatctttgaagacggggcgaagaaaaacggcgtcgacggcgagctg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatctcac
tcagccgcctatgctttggtgtcgtatcaaacgctgtggctgaaggcacactatcctgcg
gagtttatggctgcggtaatgaccgccgatatggacaacaccgagaaggtggtgggcctg
gtggatgagtgctggcgcatggggctgaagatcctgccgccggatattaactcaggtctc
taccatttccacgtcaatgacgacggggagatcgtttacgggatcggcgcgatcaagggc
gtgggcgaggggccgatcgaggcgatcatcgaagcgcgcaacaacggcgggtatttccgc
gagctgttcgatctttgcgcccgtaccgataccaaaaagctgaatcgccgcgtgctggaa
aaactgatcatgtccggcgcgttcgacaggctggggccgcaccgcgccgcgctgatgaac
tcgctgggcgacgccctgaaagcggcggatcagcacgcgaaagcggaagccattggtcag
gcggatatgttcggcgtgctggcggaagagccggagcagatcgagcaatcttattccaac
tgccagccgtggccagaacaggtggtgctggacggcgagcgtgaaacgttaggtttgtac
ctgacgggtcacccgatcaaccagtacattaaagaaattgagcgctatgtcggcggccac
aggctgaaagacatgcatccgacagaacgtggtaaaatcaccacggctgcggggctcgtg
attgctgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgttggat
gaccgttccgggcgtctggaggtgatgttgttcaccgatgcgctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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