Enterobacter roggenkampii DSM 16690: BFV67_06400
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Entry
BFV67_06400 CDS
T05556
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ern
Enterobacter roggenkampii DSM 16690
Pathway
ern03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ern00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFV67_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ern03019
]
BFV67_06400
Enzymes [BR:
ern01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BFV67_06400
Messenger RNA biogenesis [BR:
ern03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BFV67_06400
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AOP94822
LinkDB
All DBs
Position
1377879..1379258
Genome browser
AA seq
459 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFIHDIRRVLAKLPPR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGRGQGGGGRGQQPRRAEGGAPKSAGKP
PRRGNDSKPAGDNPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgcgcgatcgcagagcagggc
tacgttgagccaaccccaatccagcagcaggctattcctgccgttcttcagggccgtgac
ctgatggccagcgcccagaccggcaccggtaaaaccgcgggctttacgctgccgctgtta
gaactgctggtaaaaaatcagccgcacgccaaaggccgtcgtccggttcgtgccctgatc
ctcaccccaacccgcgagctggccgcgcagattggtgagaacgtgcgtgactacagccgc
tatctcaacattcgctcgctggtggtgttcggcggggtcagcatcaacccgcagatgatg
aagctgcgcggcggcgtggacgtgctggtggcaacgccgggccgtctgctggatctggaa
caccagaacgcggtgaagctggataacatcgaaattctggtactggacgaagccgaccgc
atgctcgacatgggctttattcacgacattcgtcgcgtgctggccaagctgccgccgcgt
cgtcagaatctgctcttctccgcgaccttctccgacgagatcaaggcgctggcggaaaag
ctgctgcataacccgctggaagtagaggtggcgcgccgcaacaccgcctctgagcaggtg
acgcagcacgttcactttgtggataaaaagcgcaagcgcgaactgctctcccagatgatc
ggccagggtaactggcagcaggtgctggtctttacccgcaccaagcacggcgcgaaccac
ctggcggaacagctgaacaaagacggcatccgcagcgcggcgatccacggcaacaagagc
cagggggcgcgtacccgtgcgctggcggacttcaagtctggcgacatccgcgtgctggtg
gcgaccgacatcgccgcccgtggcctcgacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagactacgtgcaccgtatcggccgtaccggtcgtgcggcg
gccaccggtgaagcgctctctctggtgtgcgtggatgaacataagctcctgcgcgacatc
gaacgcctgctgaagaaagagatcccgcgcatcgaaaccccaggttatgaagtggatccg
tcgatcaaagccgagccgattcagaacggtcgtcagggcggtcgcggtcagggcggcggt
ggtcgcggccagcagccgcgtcgtgccgaaggcggcgcgccgaagtcagcgggcaaaccg
ccgcgtcgtggcaacgacagcaaaccggccggtgacaatccgtggcgcagcggcgaaggc
aagccggcaggggaagggcagcgccgacgccgcccgcgcaagcctgctaacccgcagtaa
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