Enterobacter roggenkampii DSM 16690: BFV67_17480
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Entry
BFV67_17480 CDS
T05556
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ern
Enterobacter roggenkampii DSM 16690
Brite
KEGG Orthology (KO) [BR:
ern00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ern03016
]
BFV67_17480
Enzymes [BR:
ern01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BFV67_17480
Transfer RNA biogenesis [BR:
ern03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BFV67_17480
Prokaryotic type
BFV67_17480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOP96904
LinkDB
All DBs
Position
complement(3728442..3729491)
Genome browser
AA seq
349 aa
AA seq
DB search
MTDFDNLTYLHGKPQGNGVLKASPEDFLVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRK
LRLGALKGNAFTLVLREVTDREDVEKRLNAISDRGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKPDANQVVVGDALQLAGRGSWFVATAEE
MADVQSRVDAKGLLITAALPGTGDWGTQGDALAAEQSAVADAPELQSLLVREKVDAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagactttgacaacctgacatacctgcacggtaaaccgcaggggaacggggtgctg
aaagccagccctgaagatttcctcgtggtggaggatctgggctttgagccggatggcgaa
ggcgaacatatcctggtgcgaattctgaaaaatggctgcaatacccgctttgtggccgac
gcgctggcaaaattcctcaaaattcatgcccgcgaggtgagctttgccgggcagaaagat
aaacacgccgtcacggaacagtggctctgcgcgcgcgttcccggcaatgcgatgcctgat
ttaagcaaatttgagcttgagggctgtaaggtactggaatatgcccgccacaagcgcaaa
ctgcgtctgggcgcgttaaaaggcaacgcgtttacgctggtgctgcgcgaagtgactgac
cgtgaagacgttgaaaaacgcctgaatgccatcagcgaccgcggcgtaccgaactacttt
ggcgcgcagcgctttggcatcggcggcagcaacctgcagggcgcactgcgctgggcgcaa
agcgacgcgccggtgcgtgacaggaataaacgcagtttttggttgtcggcggcccgcagt
gcgttgtttaatcagattgtgagcgaaaggctgaaaaaaccggacgcgaatcaagttgtt
gttggcgatgcgctacaattagcgggacgcggaagctggtttgtggcaacggccgaagag
atggccgatgtccagtcgcgcgtggacgcaaaagggctgctgatcaccgccgcgttgccc
ggtacgggcgactggggaacacagggcgacgcgctggccgccgagcagtcagccgtggcg
gatgcgccagaattgcagtccttgctggtgcgggaaaaagtcgacgcggcacgccgcgcg
atgctgctctatccgcagcagttaagctggaactggtgggatgacgtaaccgtcgagtta
cgcttctggctgccggcaggcagctttgccaccagtgttgtcagggaacttatcaacacc
tcgggtgattatgcgaatattgctgagtaa
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