Enterobacter roggenkampii DSM 16690: BFV67_21225
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Entry
BFV67_21225 CDS
T05556
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ern
Enterobacter roggenkampii DSM 16690
Pathway
ern03420
Nucleotide excision repair
ern03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ern00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFV67_21225
03430 Mismatch repair
BFV67_21225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ern03400
]
BFV67_21225
Enzymes [BR:
ern01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFV67_21225
DNA repair and recombination proteins [BR:
ern03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFV67_21225
MMR (mismatch excision repair)
Other MMR factors
BFV67_21225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DMP19
Motif
Other DBs
NCBI-ProteinID:
AOP97588
LinkDB
All DBs
Position
complement(4514632..4516794)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAASRTNLLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAV
TFTNKAAAEMRHRIAQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSFGNPVEQTWQNVYKAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISIYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQVGMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQASRDRQLTLWQACRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPVSHQRMG
SPMAETDTGYKLGQRVRHSKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgatgcggttgccgcc
tcgcgcaccaacctgctggtgctggctggagcgggcagtggtaagacgcgcgtgctggtt
caccgtatcgcctggctgcagagcgtggaaaactgctcgccgtactccatcatggcggtc
acgttcaccaacaaggcggcggcggagatgcgccaccgcatcgcccagctgatgggcacc
agccagggcggcatgtgggttggcaccttccacggtctggcgcaccgcctgctgcgtgcg
caccacatggacgccaacctgccgcaggatttccagatcctcgacagcgaagaccagctc
cgtctgctgaagcgcctgatcaaggcgatgaacctcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggccagaaagacgaagggctgcgcccgcaccatattcag
agcttcggcaacccggtcgagcagacctggcagaacgtctacaaggcctatcaggaagcc
tgcgatcgcgccggcctggtggatttcgccgagctgctgctgcgcgcccacgagctgtgg
ctcaacaagccgcacatcctgcagcactaccgtgaacgcttcaccaacattctggtggac
gaattccaggataccaacaacatccagtacgcgtggatccgcctgctggccggcgatacc
ggcaaggtgatgatcgtgggcgatgacgatcagtccatctacggctggcgaggcgcgcag
gtggaaaacattcagcgcttccttaacgacttccccggcgccgaaaccatccgtctggag
cagaactaccgctcgaccagcaatatcctcagcgcggccaacgccctgattgaaaacaac
aacgggcgtctgggtaaaaaactgtggaccgacggcgtcgacggcgaaccgatttcgatc
tactgcgccttcaacgagctcgacgaagcgcgcttcgtggtcaaccgcatcaaaacctgg
caggacaacggcggcgcgctggagcagtgtgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaggtggggatgccgtaccgcatttacggcggtatg
cgcttcttcgaacgtcaggaaattaaagatgcgctctcgtatctgcgcctcattgccaac
cgtaacgacgacgcggcgtttgaacgcgtggtcaacacgccgacccgcgggattggcgac
cgcacgctggatgtggtgcgtcaggcctcgcgcgaccgtcagctgacgctgtggcaggcg
tgccgcgagctgctgcaggaaaaggcccttgccggacgcgcggccagcgccctgcagcgc
ttccttgaactgattgacgccctggcgcaggaaaccgccgacatgccgctgcacgtgcag
accgaccgggtgattaaagactccggcctgcgcaccatgtacgagcaggaaaaaggcgag
aagggccagacccgtattgagaacttagaggaactggtcacggcaacgcgccagttcagc
tacaacgaagaagacgaagacctgatgccgctgcaggcgttcctctcccacgccgcgctg
gaagcgggcgaagggcaggcggacacctggcaggatgcggttcagctcatgacgctgcac
tccgccaaaggtctggagttcccgcaggtgtttatcgttggcatggaagaggggatgttc
ccgagccagatgtcgctggatgaaggcggacgtctggaagaggaacgccgtctggcctac
gtgggcgtgacgcgagcgatgcagaagctgacgctgacctacgctgaaacccgccgtttg
tatggcaaagaggtctatcaccgtccgtcgcgctttatcggtgaactgccggaagagtgt
gtcgaagaggtacgtctgcgggcgagcatcagccgtccggtcagccatcagcgcatgggc
tcgccgatggcggaaaccgacaccggctacaagctgggccagcgcgtgcgccattcgaag
tttggcgaaggcaccattgtgaatctggaaggcagcggcgagcacagccgcctgcaggtg
gcgttccaggggcaggggatcaaatggctggtggccgcctacgcgaagctggaaacagtc
taa
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