Enterobacter roggenkampii DSM 16690: BFV67_21365
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Entry
BFV67_21365 CDS
T05556
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ern
Enterobacter roggenkampii DSM 16690
Pathway
ern03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ern00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFV67_21365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ern03021
]
BFV67_21365
03019 Messenger RNA biogenesis [BR:
ern03019
]
BFV67_21365
Transcription machinery [BR:
ern03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BFV67_21365
Messenger RNA biogenesis [BR:
ern03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BFV67_21365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AOP97612
UniProt:
A0A145KIW2
LinkDB
All DBs
Position
complement(4542932..4544191)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
cagcacgctaagagtggcgaagatatctttggcgacggtgtgctggagatattgcaagac
ggatttggtttcctccgctctgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctcctaaagagggtgaacgctactttgcgctgttgaaagtcaatgaagttaac
ttcgataagccagaaaactcgcgcaataagatcctctttgagaacttaacgccgctgcac
gcgaactctcgcctgcgtatggagcgtggtaacggttctaccgaagacttaaccgcgcgc
gttctggatctggcctcaccaatcggtcgtggtcagcgtggtctgattgtggcgccgcca
aaagcgggtaaaaccatgctgctgcagaacatcgcgcagagcattgcttacaaccaccct
gactgtgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggttaaaggtgaagtggttgcttctaccttcgacgagccagcatctcgccacgtt
caggttgcggaaatggttatcgagaaggcaaaacgcctggttgagcacaagaaagacgtg
atcatcctgctcgactctatcacccgtctggcgcgtgcctacaacaccgtggtcccggcg
tctggtaaagtcctgaccggtggtgtggatgctaacgccctgcatcgtccaaaacgtttc
ttcggtgctgcacgtaacgtcgaagagggcggcagcctgaccatcatcgcgaccgcgctg
attgataccggctccaaaatggacgaagtgatttacgaagagtttaaagggacaggcaac
atggaactgcacctctctcgtaagatcgctgaaaaacgcgtcttcccggcaatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccacccaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggtgaaatcgacgcgatggagttcctcatt
aacaaactggcaatgaccaaaaccaacgacgatttcttcgacatgatgaaacgctcgtaa
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