Enterobacter roggenkampii DSM 16690: BFV67_21375
Help
Entry
BFV67_21375 CDS
T05556
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ern
Enterobacter roggenkampii DSM 16690
Pathway
ern03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ern00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFV67_21375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ern03019
]
BFV67_21375
Enzymes [BR:
ern01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BFV67_21375
Messenger RNA biogenesis [BR:
ern03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BFV67_21375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOP97614
UniProt:
A0A0F0UGK2
LinkDB
All DBs
Position
4545011..4546279
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPEALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgcgctgcacccgaaggtg
attgaagcccttgaaaataaagggtttcataactgcacgcccattcaggccctcgcgctg
ccgctgacgctggccggtcgcgatgttgccgggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccagcgattgcagaccgc
aaagttaaccagccgcgcgcgctaattatggccccgacgcgagaactggcggtacagatc
cacgcagacgctgaacccctggcgcaggctaccggcctgaagctgggcctggcctatggc
ggcgacggctacgataaacagctgaaagtgctggaaagcggtgtggatatcctgatcggt
accaccggccgtcttatcgattacgccaaacagaaccacattaacctcggtgccatccag
gttgtggtgctcgatgaagctgaccgcatgtacgatctgggcttcattaaagacatccgc
tggctgttccgccgtatgcctccggctaatcagcgcctgaatatgctgttctctgcaacc
ctctcctaccgcgttcgcgagctggcgttcgaacagatgaacaacgccgaatacgtagaa
gtggaaccggagcagaaaacgggtcaccgcattaaagaagagctcttctatccttctaat
gaagagaaaatgcgcctgctgcaaacgctgattgaagaagagtggccagatcgcgccatc
atctttgccaacaccaaacaccgttgtgaagacatctggggccacctggctgccgatggt
caccgtgttggcctgttgaccggcgacgtggcgcagaaaaaacgcctgcgtattctcgaa
gagtttacccgcggcgatctcgatattctggtcgccaccgacgtggctgcacgtggttta
cacattccagccgtaacgcacgtctttaactacgatctgccagacgactgtgaagactac
gtacaccgtatcggtcgtaccggtcgcgcgggcgcaagcggtcactctattagccttgcg
tgtgaagagtatgcgctgaaccttccggccattgagacctacatcggtcactctattccg
cagagcaaatacaatccggaagcgctgttaagcgaactgccgccgcctaagcgtcttacc
cgcccacgctccggcaatggtccgcgtcgttcaggcggcgcaccgcgtaatcgtcgtcgt
tcaggttaa
DBGET
integrated database retrieval system
