Encephalitozoon romaleae: EROM_020200
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Entry
EROM_020200 CDS
T03458
Name
(RefSeq) DNA replication factor C small subunit
KO
K10756
replication factor C subunit 3/5
Organism
ero
Encephalitozoon romaleae
Pathway
ero03030
DNA replication
ero03410
Base excision repair
ero03420
Nucleotide excision repair
ero03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EROM_020200
03410 Base excision repair
EROM_020200
03420 Nucleotide excision repair
EROM_020200
03430 Mismatch repair
EROM_020200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ero03032
]
EROM_020200
03036 Chromosome and associated proteins [BR:
ero03036
]
EROM_020200
03400 DNA repair and recombination proteins [BR:
ero03400
]
EROM_020200
DNA replication proteins [BR:
ero03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EROM_020200
DNA Replication Termination Factors
ELG1-RFC complex
EROM_020200
Chromosome and associated proteins [BR:
ero03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EROM_020200
DNA repair and recombination proteins [BR:
ero03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EROM_020200
Check point factors
HRAD17(Rad24)-RFC complex
EROM_020200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
AAA_22
Rad17
AAA_30
AAA_16
Rep_fac_C
AAA_14
RuvB_N
RCF1-5-like_lid
AAA_5
Viral_helicase1
RNA_helicase
AAA_19
AAA_24
Mg_chelatase
DEAD
PIF1
AAA_28
AAA_11
MCM
AAA_33
AAA_7
ATPase_2
AAA_18
DUF815
AAA_6
bpMoxR
Gp44_lid
DUF5906
AAA_2
TsaE
TniB
ABC_tran
DNAX_ATPase_lid
Thymidylate_kin
nSTAND3
AAA_assoc_2
AAA_17
IstB_IS21
Parvo_NS1
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
20520778
NCBI-ProteinID:
XP_009263992
UniProt:
I7AD17
LinkDB
All DBs
Position
II:20946..21872
Genome browser
AA seq
308 aa
AA seq
DB search
MHQPWTEKYRPGTLLEMVGNKEVIASLQSILEAGKIPNMLFYGPPGTGKTTSIRAIARSL
PRSCVLELNASDERGIATVRETIKDFASTYSKMMKLVILDEADMMSRDAQNALRRIIEDF
SANTRFCLIANHSRKIIPPILSRCTKFRFGPIESTESRIKEICRKEGIKYTEDGIAAVSK
VSEGDMRKAVNDVQGISLSLGLIDERNVHKFNGIAPAQIYEEVFMDLGNMSMVELRARIE
DLRYEYGIDCDALIDNLGGIARKSKMRNKTKILKELSDIERRRSIGCNEKLQLDAVISVF
ILNRDNSL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagccatggacagagaagtaccgcccgggaacacttttggagatggttggaaac
aaagaagttattgcatctcttcagtctattctagaggcaggcaaaatccccaacatgcta
ttctatgggccaccaggcacgggaaagacaacgtcaataagagctattgcaagaagtctt
ccgagatcatgtgttcttgagctgaatgccagtgatgagaggggaatagcaacggtaagg
gaaactataaaagattttgcatctacatactccaagatgatgaagctggtgatattggat
gaagcagacatgatgagcagagatgctcagaatgccctcagaagaataattgaggacttc
agtgcaaatacaagattttgcttaatagccaaccactcaagaaagataattcctcctatt
ctctctagatgcaccaagttcagatttgggcctattgaaagtacagagagcagaatcaaa
gaaatatgcaggaaagaaggcataaagtacactgaagatgggattgcagctgtatcaaag
gtgtcagaaggagatatgcgtaaggctgtaaatgatgttcaggggatatcgttatctctg
gggttgattgatgaaagaaatgtccataaattcaatggaattgctcctgcgcagatttat
gaggaggtgtttatggatctcggaaatatgagcatggtggagctcagagctaggattgaa
gacctgagatatgaatatggaatagactgtgacgctttaatcgataaccttggcgggatc
gcccggaaaagtaaaatgagaaacaaaacgaaaatattgaaagagttgagtgatatcgaa
cgtagaagaagcataggatgcaatgaaaaacttcaattagatgcagtcatttctgtattt
atactgaatagggataattccttatga
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