Encephalitozoon romaleae: EROM_020840
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Entry
EROM_020840 CDS
T03458
Name
(RefSeq) pre-mRNA 3'-end processing cleavage and polyadenylation factor
KO
K14408
cleavage stimulation factor subunit 3
Organism
ero
Encephalitozoon romaleae
Pathway
ero03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EROM_020840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_020840
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
EROM_020840
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
20520845
NCBI-ProteinID:
XP_009264056
UniProt:
I7ALK9
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Position
II:complement(93236..94717)
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AA seq
493 aa
AA seq
DB search
MDVEENAGIELESPSAVMEHARDLYMSKDYRNLEVLFGKCLKKSYNLDFWMLYIEYVKKV
SQKKFKLYEVYEFTLGQFENYWDSYVLYKEYIEELGKIEDEQTRIEKIRNGYMRALQTPM
NSLSELWKDFENFELELNKITGKKIVSDTLPIFQSSFQRYQQIQPLIRSWSIKNAAKLIN
LEMENEAKLGARAHESRMHFIHSYILDSFYYADEAYFFYSEYLIGIGQKERAKKVIQRGI
GMNDGMFLSLYYGFVMDEESVYADLKGKYCAKEGDGTEKTLSREGDLIRINHLNYVLKKR
GLESFRKLFIELGGEGIGPHVFIYCAFVEYYATGSRATPYNIFSSGLLKHPTSTLLKEEF
FLFLLKIGDEENARALFKRLEKTSRMWDSMIEYEFMVGSMELFRELVDQKMGSIRDNTIL
PSLPVKDQSIQMEGILGKYHCFLSSFNFLDLKIKDNSRLLDEFVENLPKISQQNNVLSNL
KPEKIIDLLKCIQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagaagagaatgcagggatcgagctggagagcccatctgctgttatggagcat
gcaagagacttgtacatgtcgaaggattatcgaaacctggaggtattgtttggaaagtgc
ttgaagaagtcctacaatctggatttctggatgttatacattgagtatgttaagaaagtc
agtcaaaagaagttcaagctttatgaggtgtatgagtttacattaggacagtttgagaat
tactgggactcttatgtactgtacaaggagtatattgaggagttaggaaagattgaggat
gagcagacaaggattgagaagataaggaatggatacatgagggcgttgcagacacccatg
aattcgctaagcgagctgtggaaggactttgaaaactttgagcttgagctcaacaagatt
acagggaaaaagatagttagtgacactcttcctatattccagagctcgtttcaaagatac
cagcaaatacagccacttataaggagttggagcatcaaaaatgcagcaaagctaataaac
ctagagatggagaacgaggcgaagcttggggcaagggcccatgagtctcggatgcacttt
atacacagctacattctggactcgttctactatgcagatgaagcctattttttttatagt
gaatacctgattggaattggacaaaaggaaagggcaaagaaagtgatacaaagagggatt
gggatgaatgatggaatgtttctatctttgtattacgggtttgtgatggacgaagagagt
gtctatgcagatctgaaaggaaagtactgtgcaaaagagggagacggcaccgagaagact
cttagcagagaaggagacctgataagaatcaaccatttgaactatgtcctaaagaaaagg
ggccttgagtctttcaggaaattgtttatcgagcttggaggtgaaggaataggccctcat
gtattcatatactgtgcgtttgttgagtactatgcaacagggagccgggcaacaccttac
aacatcttttcctctggacttctgaagcatcccacctctactttgctgaaagaagagttt
ttcctatttctactcaagataggggatgaggagaatgcaagagccctgttcaagagactc
gagaagacaagtaggatgtgggattcgatgatagaatacgagttcatggttggaagcatg
gagttgttcagggagcttgttgaccaaaagatgggctcaatcagagacaacacaattctt
ccctcccttccggtgaaagaccaaagcatacagatggaaggaatattaggaaagtaccac
tgctttcttagttcgtttaacttccttgatctgaagattaaagataactcaaggcttcta
gacgaatttgtagagaaccttccgaagataagccagcagaacaatgtgctttctaactta
aagcccgagaagataatagatctcctcaaatgtattcaatga
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