Encephalitozoon romaleae: EROM_050320
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Entry
EROM_050320 CDS
T03458
Name
(RefSeq) RSC chromatin remodeling complex subunit RSC8
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ero
Encephalitozoon romaleae
Pathway
ero03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EROM_050320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ero03021
]
EROM_050320
03036 Chromosome and associated proteins [BR:
ero03036
]
EROM_050320
Transcription machinery [BR:
ero03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EROM_050320
Chromosome and associated proteins [BR:
ero03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EROM_050320
PBAF complex
EROM_050320
GBAF(ncBAF) complex
EROM_050320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
20521264
NCBI-ProteinID:
XP_009264462
UniProt:
I7AE93
LinkDB
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Position
V:complement(40242..41444)
Genome browser
AA seq
400 aa
AA seq
DB search
MENIFPLQENVEIEEIYGSKRPNASPPKNSRTFGMRSGAYGFIDTETYHVRFPNWFKKGE
VSPLEQNGMSEVIQAIGPEKYVQSRDCIISSYEEGNRPMTVGKAFTLVDVDMGLMLKIFS
FIERWRIINYRSLIEKEMRCLKSHKTEDAKPMETTPREERSKRRGDIKKCLEESICDCGG
KANFFTRSLVFRCTACLDNGNYPQEVLRSDFLPITGSLIRNMWSRKEEFLLLEGIRKFGD
EWDSVSRYVQTKTKEQCVFHFLRIPILENTLSRADLAIGRLFETAENPTMCIVTFICGMV
HPKVASECARVAIKHISGCSQEAVIQHILDAGKEKAREQRDLERRKIERLGSVICEALLN
KIKMKIGTYKELYLSTQRVRSELVALRRGLAEDINPGGDE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacattttcccgttgcaagaaaatgttgagatagaggagatctatggaagcaaa
aggcccaatgcaagtcctccgaagaattccagaacatttggaatgagaagtggagcttat
ggcttcatagatactgaaacataccatgtgagatttccaaactggtttaaaaagggtgag
gtgagcccattagagcagaatggtatgagcgaggttatccaagcaattggacctgagaaa
tatgtacagagtcgagattgtataatcagtagttacgaagaaggaaatagaccgatgaca
gtggggaaggcatttacgctggtagatgtagatatgggcttgatgttgaaaatcttttcg
tttattgagagatggagaataatcaattatcgaagtctgattgaaaaggaaatgaggtgt
ctcaaatctcataagaccgaggatgccaaacctatggaaacaaccccaagggaagagcgt
tccaagagaaggggagatataaaaaagtgtttggaggaatcaatttgtgattgtggaggg
aaggcaaacttttttacaaggtccttggttttcaggtgcaccgcatgtcttgacaacggt
aattatccccaagaagttctaagatctgattttcttcctattaccgggtctctaattagg
aatatgtggtcgaggaaggaggagtttcttctattggaaggcattagaaagtttggggac
gagtgggattctgtaagtcggtatgtgcaaaccaaaacaaaggagcagtgcgtatttcat
tttcttcgaatccctatattagagaacacactctcgagggcggatcttgctattgggaga
ctatttgagacagcggaaaacccgactatgtgtattgttacttttatatgtggaatggtt
cacccaaaggttgcatctgaatgtgcaagggtagctatcaagcatataagcggatgttct
caggaagctgtcattcagcacatactggatgcaggaaaggaaaaggcacgcgagcaaagg
gatttagagagaagaaaaatagagaggctcgggagtgtgatatgtgaagcattactaaat
aagatcaaaatgaagataggaacatataaggaattgtatttatccactcaaagggtgcgc
agcgagctggttgcactaagaagagggcttgctgaggatataaaccctgggggcgacgaa
tga
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