Encephalitozoon romaleae: EROM_060110
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Entry
EROM_060110 CDS
T03458
Name
(RefSeq) Rad3/XPD DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ero
Encephalitozoon romaleae
Pathway
ero03022
Basal transcription factors
ero03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EROM_060110
09124 Replication and repair
03420 Nucleotide excision repair
EROM_060110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ero03021
]
EROM_060110
03036 Chromosome and associated proteins [BR:
ero03036
]
EROM_060110
03400 DNA repair and recombination proteins [BR:
ero03400
]
EROM_060110
Enzymes [BR:
ero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EROM_060110
Transcription machinery [BR:
ero03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EROM_060110
Chromosome and associated proteins [BR:
ero03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EROM_060110
DNA repair and recombination proteins [BR:
ero03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EROM_060110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
nSTAND3
Motif
Other DBs
NCBI-GeneID:
20521408
NCBI-ProteinID:
XP_009264603
UniProt:
I6ZTV8
LinkDB
All DBs
Position
VI:13186..15417
Genome browser
AA seq
743 aa
AA seq
DB search
MKIQIDEVLVYFPYDSVYPEQLKYMREIKRSLDNRGHCLLEMPSGTGKTVALLSMTISYQ
LHMKAKNDHFKIVYCSRTVPEVEKALRELDGVVSYIKKHRPIEFLGLGLTGRKNLCINKV
AFKSFNVDVACRRLVNRLGESRCDFYENLNNFNEVPVAVYDFSRLKEIGEKKGICPYYLV
RRSIPVCDCIIYPYNYLIDPRIYSIVSKELGPNSVVIFDEAHNIDSHCIEVLSIEIKRNI
LEGATRAIKNLENLLRQKGPTTGEESAQYEKMKEKIREPVADSIPYFYATGEGSYEFIPG
NLRNSYHFISALKRITEFFKTKLKTTHLTTESTESFCKSIKELSFIGKKALRFCSQRLGM
LSQSLGLDDEDMTHLKTVADFSTMVSMYSKGFVVIFEPFDSQASTVFNPTLRLACLDSSI
AMSSVFARFRNVIITSGTMSPIDMYPKILNFVPSRTAEIGATLERNSISPLIITKGNDQM
TLRALSEDIETTDKCNSDMLTTSFSLRSDPSVVRNYGHLMIELSRVVPDGIVCFFPSYMY
MEEIVSLWAETNIINEINKNKLVFVETPDGRETEMALSNYRRACDNGRGGMLFSVARGKV
SEGVDFEDGYGRCVVMLGVPFQYTESVRLRKRLDFLREEYGIKEYDFLTFDAMRHAAQCL
GRVLRNKNDYGLMILADERFERNDKKGKLPKWIQNCIDGGNCNLSVDMALSIARRFFREM
AQECIGAGNSLLSEKDIEAFSFE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccagatagatgaagttctagtatactttccttatgattctgtgtatccagag
caactaaaatacatgagagaaatcaaacgaagcctcgacaacagggggcattgcctactg
gagatgccttctggaacagggaaaactgtggctcttctcagcatgacaataagctatcag
ctgcacatgaaggctaagaatgatcattttaagatagtttattgctcacgaactgttcct
gaagttgaaaaggcattgagagaattggacggggttgtttcatacataaaaaaacaccgt
cctattgagttccttggcctggggcttacaggtagaaaaaacctatgcattaacaaggta
gcattcaaaagtttcaacgtagacgttgcatgcagaaggcttgtgaacaggttgggtgag
tctaggtgtgacttctacgaaaatcttaataacttcaacgaggtacctgttgcagtatac
gacttttcccggcttaaagaaattggagagaagaaaggaatttgcccatactaccttgta
cgaagatctattcctgtttgcgactgtataatatatccttacaactacttgatagacccg
aggatttattcaatagtttcgaaagagctgggacccaacagtgttgtgatattcgatgag
gctcacaacatagatagtcactgcatagaagtattgtcaatagagatcaaacgaaacatc
cttgaaggtgcaactagagcaatcaaaaacctggaaaatctcctgagacaaaaagggccc
acgaccggtgaggaaagcgcacagtatgagaaaatgaaggagaagattagggagccagtt
gcagattcgattccttacttttatgcaacgggggagggaagttatgaattcattcctgga
aaccttaggaattcatatcattttatatctgcattgaaaagaataactgaattcttcaag
actaagttaaaaacaacacacctaaccaccgaatctactgaatctttctgcaaaagcatc
aaggagctgtcttttattggcaagaaggcattaaggttctgttcgcaaaggctaggaatg
ctatctcagtccctagggcttgatgatgaggatatgacacatttaaaaaccgtagccgac
ttctctacaatggtctctatgtattcaaaaggatttgtagtaatattcgagcccttcgac
tcacaagcatcaactgtgtttaatccaacccttcgtctggcatgcttggattcttcaata
gcaatgtcttctgtctttgcgaggtttagaaacgtgataataacaagtggaacgatgagt
cctattgacatgtatccaaagatccttaactttgtaccttcaagaacagcagagattgga
gcaacacttgagagaaactcgatttcccctctaataataaccaaagggaatgaccagatg
actttaagggctctctctgaggacatagaaactacggataaatgtaatagcgacatgctt
accacctcgttctcccttagatctgacccctctgttgttcgaaactatgggcatcttatg
atagagctttctagggttgttccagatggaattgtatgcttctttccctcctacatgtac
atggaagagatagtaagtctctgggcagaaaccaatataatcaacgagataaacaagaat
aaattggtgtttgttgaaacaccggacggtagagaaacagagatggctttatcgaattat
agaagggcatgtgataacggaagaggaggaatgcttttcagcgttgcccgaggaaaggtg
tctgaaggcgttgattttgaagatggatatggaagatgtgttgtaatgctgggagttcct
tttcagtacacagaaagcgttaggctgagaaaaagattggactttctgagagaagaatat
gggataaaggagtatgatttcttgacattcgatgcaatgagacacgctgcccagtgtctg
ggacgggtactgagaaacaagaacgactatgggctcatgatacttgcagatgaaaggttt
gagaggaatgataagaagggtaaacttccaaaatggatacaaaactgtattgatggagga
aattgcaacctaagtgttgacatggctctctcgattgcaaggagattctttagagagatg
gcacaggaatgcataggtgctggaaatagtcttttgagtgaaaaagacatcgaggctttt
tcatttgaataa
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