Encephalitozoon romaleae: EROM_060710
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Entry
EROM_060710 CDS
T03458
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
ero
Encephalitozoon romaleae
Pathway
ero03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EROM_060710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ero03021
]
EROM_060710
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_060710
Transcription machinery [BR:
ero03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EROM_060710
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
EROM_060710
U7-dependent histone pre-mRNA processing factors
EROM_060710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
20521467
NCBI-ProteinID:
XP_009264661
UniProt:
I7AN59
LinkDB
All DBs
Position
VI:complement(91558..93336)
Genome browser
AA seq
592 aa
AA seq
DB search
MEKIRYHLVERYSEEGLTFLIFYLKNMSPIEMVYFFSTASKILDRDSAVILLAYLRSAQS
KGMICPRYAQRSVNYHVHMLNKRIAKRIPSMLNRFASEMRLFDFTEVRGKKGGEGMKKEF
DPLSLLIDLVFETLVKTSNIEIENTIQTYFHEKREEVLPSPITEAFNLLGRIKDANTIDI
GISRIVRMLEVRDSLEALLFISKNEKYSHSFFVYAYLLNRDVYDATVELILESKQYFRID
IVKHLVSLNVEKVVERITDETVEILNHMIKERRVYVEKIVKMISEERVNISRESMLEVFK
ENYEVLGDYAPCFKLSGQELIEVSKSNDRALPLTLDAVDTQESMNSFVDLLKEKEDWAVI
NLIKSMKNDQRKETLIRTILRRRAIKGQLRIYLLDNYLKDDRFIYDLLPYLEKSDVYKYI
PDYVVDTESLNTFLRAIECSELLIFAHRIPDISKAIRILNLCFKSPRFNESDFLFTLTTL
EKELPLLIVRTLIQTLLKFPNLKNFVVSFLSRLVRRNIWKQEEMVEGVVKCFEIIGAAAV
DIIVYLDSDATAKVLGKSKGLRNLCREHLRKEGSGKRHDSMLRSVMGRFGNK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagataagataccacctagtcgagaggtattctgaagagggtctaactttcctt
atcttctatctcaagaatatgagtcccatagagatggtttacttcttctccacagcttca
aaaatactagatagagacagtgctgtgattcttcttgcatatcttcggagtgcacagagc
aagggaatgatatgcccgaggtatgcacagaggtcggtaaactaccatgtgcatatgctg
aacaaaaggatagcaaagaggattccaagtatgcttaatcgctttgcttctgaaatgagg
ctatttgactttacggaggtacgtggaaagaaaggcggggaagggatgaagaaggagttt
gaccctcttagccttctcattgacctagtttttgagacacttgtgaaaaccagcaacatt
gagattgagaacaccatccagacatacttccacgaaaagagggaggaagtgctcccgagc
ccgattactgaggcctttaatctccttggaaggatcaaggatgcaaatacaatagacata
ggtatctcaaggattgtgaggatgcttgaagttagggattccttggaggcattactgttc
ataagcaagaacgaaaagtacagccactcattttttgtgtatgcatacctactgaaccgg
gatgtctacgatgccacggttgagctaattcttgagagcaagcaatactttaggattgac
atcgtcaagcatcttgtttcacttaatgtagagaaggttgtagagaggataacagatgag
actgtggagatattgaatcacatgatcaaggaaaggagagtatatgttgaaaagattgtg
aagatgatttctgaggaaagagtaaatatatcgagggaaagcatgctagaagtcttcaag
gagaactacgaagttcttggagactatgcaccttgctttaaactgagtgggcaggaactg
attgaggtatctaagtctaatgatagggccttacctcttacattggatgctgttgacaca
caggaaagcatgaacagttttgtagatctgttaaaagaaaaggaagattgggctgtgatt
aatctcatcaagtccatgaagaacgaccaaaggaaagagacccttatacggactattctc
aggaggagggctatcaagggccagcttagaatctatctactagataactatctgaaggac
gatcgttttatatacgacttgttgccgtatttggagaaatctgatgtgtacaaatacatt
cctgactatgttgttgacaccgagtccttgaatacctttctgagggctatagaatgttct
gagcttctgatctttgcacataggattccagacatctcaaaggccatccggattcttaac
ctctgcttcaaatctccaagattcaacgagagtgactttttgttcacattgactactttg
gagaaggagctgcctcttctgattgttcggaccttgatccaaactctgttgaagtttcca
aacctgaagaactttgttgtttcgtttctgtcaagacttgttaggaggaatatatggaag
caagaggagatggtggagggtgttgtaaagtgctttgagattattggggcggctgcagtt
gatatcattgtatatttagattcggatgccacggccaaggttctgggaaagagtaaaggg
cttagaaatctgtgccgtgagcatttaaggaaggagggttctgggaaacgccacgattca
atgctaaggtctgtgatgggtaggtttggtaataaatag
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