Encephalitozoon romaleae: EROM_070780
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Entry
EROM_070780 CDS
T03458
Name
(RefSeq) Ski2-like ATP-dependent RNA helicase
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
ero
Encephalitozoon romaleae
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_070780
Enzymes [BR:
ero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EROM_070780
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EROM_070780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
WHD_SNRNP200
ResIII
Helicase_C
DEXQc_Suv3
GerD
CobA_CobO_BtuR
Pirin_C_2
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
20521637
NCBI-ProteinID:
XP_009264826
UniProt:
I7ANI0
LinkDB
All DBs
Position
VII:<96030..>99209
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AA seq
1059 aa
AA seq
DB search
MDRLVRRVSHQLGISPKETMDMVSQALRDPSYQERLVEILGYEMMDEIEMICKNQEYFTS
QDKVVDRGFYVEYNFPESIPIESDGSEIICTDATGEDQRYFDYKTFNRVQSKVFKAAYRG
DGNLLVCAPTSSGKTDVALLCVLRALGKGDKVIYIVPMRALATEIASKYRKKLGGQRVVE
YTGDTEMRVEDMVRYDVVVSTPEKFDVVTRKQYNVFQGRIGLVILDEIHILQDERGPVVE
AIVCRMFRHVELWQRHIRIVGLSATLPNYSDVGMFLRAEHVFSFDEGYRPVPLRMCVVGM
TRKSKPQLEEDFLRRKVKEYLDDGKQVLVFVHSRGETTKTAKLLSDEDVKREVKDGVVGG
ALLELVRRGVGIHHAGLPRRIRLYMEDEFKMKRIKILVTTSTLAWGVNLPAYAVIIKGTR
FYDSSKGMFSDIGILDVLQIFGRAGRPQFDVRGEGCLITTGDKMDHYVSLLKNSRDVESR
LLQHVADVMNAEIYLGTIEDVSTAMVWLKSTFMYIRMSKNPMCYGVSMEDLRDENKALSD
YVILTCKRLGECGMIRIYKKRIGDFRTWKFCSTEYGRIASMYYLPHETVEGWLKEISDTH
DEDAILRLCFESKELSSLGYREEDEETIKEICSELGVMYEMSMGCKLMALVKAHIRRYPI
TRFSLVCDTEHVVKNLRRVLMGLSQIFMFQGKHLAVSRCCILLKRIERQRERPWNCNNNA
AVSLSRANEMVKIEISLKDKGEYWVFVWDGDFLVHSGLFKQRANLFIKSESDVLRIEIVA
RNEWERTEREYKVDRDTSVKSLYYNGVHECSQKWSIVGEKQGCAHFNVINTFSDLLKATH
EWILNHGSASELKILLLTNKRIDSLDLKKERRVHINLCYRKELEDISGVSVAYLRPDVPS
WFSKYILCDFSLQIRFIQVDCGLFRERLQFMNSCITSMGSYENSKVVIVAPDPTDMRNTA
RDLGTRMVLRELSHGKYSLRVRCGNPRAGDTGVFVTAFSKSLDIEEGFTVIFKGCSNSDG
YFPVFEILRICDSREVFIYESRDYIEYFSCCILNSTREF
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggacagactggttaggagagtttctcaccagcttggaatatctccaaaggaaacaatg
gatatggttagccaagcacttagggatccatcttatcaggaaagactggtcgagattctt
ggatacgagatgatggacgagatagagatgatttgcaagaatcaagagtactttacttct
caggacaaagtagtggacagaggattttatgtggagtataactttccggagtccattccc
atagaaagtgatggttctgaaatcatttgcacagatgctactggagaggatcaaaggtac
ttcgattacaagacatttaacagggtccagtctaaggtgtttaaggctgcatatagaggt
gatgggaacctgctcgtatgtgcacctacaagctctggaaagacagatgtcgctcttctg
tgtgttctcagggcattgggaaagggagacaaggtcatctatatagttccaatgagggca
cttgcaacggaaatagcatctaaatatagaaagaagcttggaggccaaagagttgtggaa
tacacaggagacaccgaaatgagggttgaggatatggtaagatatgatgtagtagtatct
acacccgagaagtttgacgtggtgacaaggaagcagtacaatgtgttccaaggcaggatt
gggcttgttatacttgatgagattcatattcttcaagacgagagaggacctgttgtggaa
gcaattgtatgcaggatgtttaggcatgtggaactttggcaaaggcatatacgcattgtg
gggctgtctgctacccttcccaactattcagacgtgggaatgtttttgagagctgaacac
gtgtttagctttgacgaaggatacagacctgtcccgcttcggatgtgtgttgttggaatg
acaagaaaaagcaagcctcaacttgaagaagatttcctaaggaggaaggtaaaagaatac
ctggatgatggaaagcaggttctagtgtttgttcattccaggggggagacaaccaaaact
gccaagcttttaagcgatgaagatgtaaagagagaagtgaaggatggtgtggtaggtggg
gcacttctagagcttgtaagaagaggagttgggatacatcatgccggacttccaaggagg
ataaggctgtatatggaggatgaatttaagatgaagagaataaagatactggttacaaca
tcgactttagcttggggggtgaatctcccagcatatgccgtaataatcaagggaacgaga
ttctatgattcttcaaaaggaatgtttagtgatatagggattttagatgtgctccagata
tttggaagggcagggagacctcaatttgacgttagaggagaggggtgcttgataacgaca
ggggataagatggatcactatgtgtctctgctcaagaacagcagagatgtggaaagcagg
ctgcttcagcatgttgcagatgtaatgaatgcagaaatctatttaggcacgattgaggat
gtcagcacagctatggtgtggctgaagagtacatttatgtatatccggatgtctaagaat
ccgatgtgttatggggtgagcatggaagatctacgtgatgaaaacaaagcattgtctgat
tatgtcattcttacctgcaaaaggttaggagaatgtggaatgataagaatatacaaaaag
aggattggagacttcaggacatggaagttctgtagtacagagtatgggaggattgcaagc
atgtattacttaccacatgaaacagtagaaggatggctgaaggaaattagcgacacgcat
gatgaagatgccatacttagactgtgctttgagtctaaggagctttcttccctaggatat
agagaagaagacgaagagaccatcaaagagatttgttctgagttgggtgtcatgtatgaa
atgtccatgggatgtaagcttatggcccttgtaaaggctcacatcaggagatatccaata
acaaggttttcgcttgtgtgtgatacggagcatgttgtcaaaaacctccggagggttctt
atggggttgtctcaaatctttatgttccaaggcaagcacctggcagtttcaagatgctgt
atactattgaaaaggatagagagacaaagagaaagaccttggaattgcaataacaacgct
gccgtgagtctttccagggcgaatgagatggtcaagatagagatttctttgaaagataag
ggagaatactgggtttttgtgtgggatggagattttctcgtccactctggcctttttaag
cagagagccaatttatttataaagtcggagtccgatgttctgaggattgaaattgttgcc
agaaatgaatgggaaaggacagaaagagaatacaaggttgatagagatacaagtgtgaaa
tctctgtattataatggagtccatgaatgttctcagaaatggtctatagtgggagaaaag
caaggttgtgctcacttcaatgtcataaacaccttctctgatctcctcaaggccacacat
gaatggatattgaaccatggaagtgcttctgaactcaagatccttcttctaactaataaa
aggatagactctctcgatctgaagaaggagaggcgtgttcacatcaacttgtgttataga
aaagagcttgaagatatttcaggggtgagtgtggcctatttgaggccagatgttccttcc
tggttttctaagtatattttatgtgatttttctcttcaaataaggtttatacaggtagac
tgtgggttatttagagaaaggctacagttcatgaattcttgtatcacatcgatgggcagc
tatgaaaactcgaaggttgtcatagtagcgcctgatccaactgacatgaggaatacagca
cgagatctcggtacaagaatggttctaagagaactatcccatggaaaatacagtctgagg
gtgagatgtggaaatcccagagcaggagacacaggagtatttgtgacagcttttagtaaa
agtttggatatagaggaggggtttacggtgatcttcaagggatgttctaactctgatgga
tactttcctgtatttgagatattaagaatatgtgattctagagaggtgtttatatatgag
agtagagattatatagagtacttcagctgttgcatattgaatagcaccagggaattctga
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