KEGG   Encephalitozoon romaleae: EROM_080730
Entry
EROM_080730       CDS       T03458                                 
Name
(RefSeq) DNA-directed RNA polymerase II fourth largest subunit
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ero  Encephalitozoon romaleae
Pathway
ero03020  RNA polymerase
ero03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ero00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EROM_080730
  09124 Replication and repair
   03420 Nucleotide excision repair
    EROM_080730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ero03021]
    EROM_080730
   03400 DNA repair and recombination proteins [BR:ero03400]
    EROM_080730
Transcription machinery [BR:ero03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     EROM_080730
DNA repair and recombination proteins [BR:ero03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EROM_080730
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 20521809
NCBI-ProteinID: XP_009264989
UniProt: I7ASS0
LinkDB
Position
VIII:73584..73898
AA seq 104 aa
MLSEARYLLEGQKERFRADFRSNASKIFRSTLGYLDEFCRIKDKSVAEDLRTTFSGLGFS
ELEIALLGSLFPQSVEEAKTLIPSLASKSDDAIGQAVEKIQQLT
NT seq 315 nt   +upstreamnt  +downstreamnt
atgctgtcggaggcaaggtatttgctcgaaggacaaaaagaaagatttagagcagatttt
agatcgaatgcatcgaagatatttaggtcaacattaggatacctggatgaattctgcaga
atcaaagataagtctgttgccgaggatctccgcacaaccttttctgggttaggcttcagt
gagcttgaaatagccttgcttgggtccttgtttcctcagtctgttgaggaagccaagacc
cttattccatctctggcctcaaagagtgatgatgccattggacaggctgtagagaagata
caacagctgacctga

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