Encephalitozoon romaleae: EROM_091230
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Entry
EROM_091230 CDS
T03458
Name
(RefSeq) ribonuclease
KO
K11600
exosome complex component RRP41
Organism
ero
Encephalitozoon romaleae
Pathway
ero03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EROM_091230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_091230
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EROM_091230
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
EROM_091230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
20564347
NCBI-ProteinID:
XP_009265236
UniProt:
I7APH5
LinkDB
All DBs
Position
IX
Genome browser
AA seq
210 aa
AA seq
DB search
MIVSEEGFREDGRRPRELRRVEVVRRMVGKKGVVDVRQGNTQVSVMCGGAKEAGKLDIEV
EFYAVSRQEPVNEKRILEYEDVLLDIFSDILLPETSVGIKVVVREDGGSLLSTMVNCITL
CLSYFGIPLMDMCYSATIGEHCIDLTSTEESQKIPVITVAYLMNRKSIAYLSLNGRIVCD
KLQSSILEGVDACYSVGEHFKGFFSFSPVQ
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgatagtttctgaggagggattcagagaagatggaagaaggcctagggagctgaggaga
gtggaagtagtaaggaggatggttgggaaaaaaggtgtggtggatgtaaggcaaggaaat
actcaagtgtctgtgatgtgtggtggggctaaggaggctgggaagctggacattgaggtg
gagttctatgctgtttcaaggcaggagcctgtaaacgagaaaaggatattggagtatgag
gatgttctattagatatatttagtgacatcctgcttcctgaaacctcagtaggcatcaaa
gtcgttgttcgagaagacggtggatcgttattgtccaccatggtcaattgcataactctt
tgcctatcatactttggaattcccctgatggacatgtgctactctgctactatcggagaa
cactgtatcgaccttacgtccacggaggagagccaaaagattcctgtcatcaccgttgca
tatctaatgaatagaaaaagcattgcctatctgtctctgaacggcaggattgtatgtgat
aagctacagtcttctattcttgaaggtgtggatgcctgctactctgtcggagagcatttc
aaaggcttcttttccttctccccagtacagtga
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