Encephalitozoon romaleae: EROM_091630
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Entry
EROM_091630 CDS
T03458
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ero
Encephalitozoon romaleae
Pathway
ero03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EROM_091630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_091630
03036 Chromosome and associated proteins [BR:
ero03036
]
EROM_091630
Enzymes [BR:
ero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EROM_091630
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
EROM_091630
mRNA degradation factors
5'-3' decay
Decapping complex
EROM_091630
Chromosome and associated proteins [BR:
ero03036
]
Eukaryotic type
Gene silencing
piRNA pathway
EROM_091630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
20564387
NCBI-ProteinID:
XP_009265276
UniProt:
I7APJ7
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All DBs
Position
IX
Genome browser
AA seq
491 aa
AA seq
DB search
MPMKSMVEDVKKDRKRNGRNSHERTWKKGALQERCEEKKSSSLNDIEEFGNEVRSSKRKG
DGNHLCIKDNEKEEKRTESITSGETSSSNRSLEESIKRLLTKDVRPTDNIRWEMFGLRPL
LLKRIYTIGYEFPSPVQAASIPRALKGRNLLVRSKNGTGKTASYVIPMLNAINPDELSIQ
GIILVPIRELALQISRNVKRLSEGMGVASVPVVGGTNMQDDIIRVSNGVHVMVGTPGRIV
DLVEKKIGVISKKVILVFDEADKLLDVTFGETVTRLLELLPRERQILLYSATFPYFVTGF
IKRYMRDPLCINLMKELAPIGIKQFYTQVKPSEKLICLRSLLLKLKINQCVIFCNNIRTV
ELLAMRITGMGMPSYFIHSKMTQEDRNIVFHNFLKGKCKILVATDLITRGVDVPNTNYVI
NFDIPKSPESYLHRIGRAGRFGTRGVAISLVTIEEREMLADIEAKLGKEISPLSDGGLNR
LYESNIDKDQE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaaaagcatggttgaggatgtgaagaaagatagaaaaagaaatggaaggaat
agccatgaaagaacttggaagaagggggctttgcaagaaagatgtgaggagaagaagtct
agcagcctaaatgatatcgaggagtttggaaatgaagtgagaagtagtaaaaggaaagga
gatggaaaccatctgtgtatcaaagacaatgaaaaagaagaaaagagaacagaaagcatc
acatccggtgaaacatcttcatcgaacaggagtttggaagaaagtataaaaagattatta
acaaaggatgtaaggccaacagataacatcaggtgggaaatgtttgggttaagaccgcta
ctcttgaaaagaatatataccattggatatgaattcccttcacctgttcaagcggcatcg
attccacgtgctctgaagggaaggaatctgctagtcagatccaagaatgggaccgggaaa
acggcatcctatgtaattcctatgctcaatgcaataaaccctgatgagttgagcatccag
ggaattattttggttcccataagggagcttgcgttacagatatcaaggaatgttaaaaga
ttatctgaaggtatgggagttgcatctgtacccgttgttggagggacgaatatgcaggat
gatatcataagggtatcaaacggagtccatgtgatggtaggaacaccgggaaggatagtg
gatttagtagaaaagaaaattggagtgatttcaaagaaggtcatactagtatttgatgaa
gcagataagttacttgatgtgacatttggagaaactgttaccagacttctggagctacta
ccaagagaaagacagatcttactgtattcagcaacattcccttattttgttacagggttt
attaaaaggtacatgagagatccactatgcataaaccttatgaaggagcttgcgcctata
ggaatcaaacagttctatacgcaggtgaagccctctgaaaagcttatatgcttgaggtcc
cttcttttgaagctaaagatcaatcagtgtgtgatattctgtaacaatatcagaactgta
gaacttcttgccatgagaatcactggaatgggaatgccttcttattttatccattcgaag
atgacacaggaggacagaaacatagtatttcacaactttctaaaaggaaagtgcaagatt
ctagttgcaacagacctcattacacgcggagtagatgttccaaatacaaactatgtaatc
aatttcgatattcctaaatctcctgagtcctatctccacaggattggaagggcagggaga
tttggaacccgtggtgttgcaataagcttggttacgattgaagaaagagaaatgctagcg
gacatagaggcaaagttaggaaaagaaatatctcctctttctgatggaggtctaaaccgc
ttgtatgaaagtaacatagacaaggatcaagaataa
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