Encephalitozoon romaleae: EROM_100140
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Entry
EROM_100140 CDS
T03458
Name
(RefSeq) exosome RNAse PH-like protein
KO
K12590
exosome complex component RRP46
Organism
ero
Encephalitozoon romaleae
Pathway
ero03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EROM_100140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_100140
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EROM_100140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
20564444
NCBI-ProteinID:
XP_009265329
UniProt:
I7ATN1
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All DBs
Position
X:12841..13407
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AA seq
188 aa
AA seq
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MSRIKSMIGVIPHCTGSSRFSYNNTTVFCIVHGPSDAISRHEDPEKAFLDVRWKDMVLIN
GRIYDKYFSRVVERVISKNIILELDAWKTIQIIFNVVGEARNALFCAVNAALLALADGGI
PLKSMFYASSSFTNEEEVVVFDNDENVIDSHSFEAISRKNIESAKGFLKYVKEVQTHTLR
SKFPFSPV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaataaagtcaatgataggcgtgattccccactgcactggctcttcgaggttt
tcttacaacaacacaactgtgttctgtattgtccatgggccatcagatgccatatccagg
cacgaggacccagaaaaggcctttctagatgtaagatggaaggatatggtgcttatcaac
ggaagaatttacgataaatacttctcaagagtggttgaaagagttatttccaaaaacatc
atcttggaactagatgcttggaagacaatacaaataatcttcaacgttgtaggagaagca
agaaatgccttgttttgtgctgtaaacgcagcacttttggcacttgcagatggaggaatt
ccactaaaatctatgttttatgctagtagttcgtttacgaacgaagaagaggttgtagtt
tttgataatgacgagaatgtgatagatagccattcattcgaagctatttcaaggaaaaat
atagaaagtgcaaagggttttctcaaatatgttaaggaggtacagactcatactttaagg
tccaaatttcctttttctcctgtctaa
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