Encephalitozoon romaleae: EROM_100470
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Entry
EROM_100470 CDS
T03458
Name
(RefSeq) DNA replication factor A protein 1
KO
K07466
replication factor A1
Organism
ero
Encephalitozoon romaleae
Pathway
ero03030
DNA replication
ero03420
Nucleotide excision repair
ero03430
Mismatch repair
ero03440
Homologous recombination
ero03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EROM_100470
03420 Nucleotide excision repair
EROM_100470
03430 Mismatch repair
EROM_100470
03440 Homologous recombination
EROM_100470
03460 Fanconi anemia pathway
EROM_100470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ero03000
]
EROM_100470
03032 DNA replication proteins [BR:
ero03032
]
EROM_100470
03400 DNA repair and recombination proteins [BR:
ero03400
]
EROM_100470
Transcription factors [BR:
ero03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
EROM_100470
DNA replication proteins [BR:
ero03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
EROM_100470
DNA repair and recombination proteins [BR:
ero03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
EROM_100470
MMR (mismatch excision repair)
EROM_100470
DSBR (double strand breaks repair)
HR (homologous recombination)
EROM_100470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
CDC24_OB3
OB_MEIOB_N
UvrC_RNaseH
DUF223
Motif
Other DBs
NCBI-GeneID:
20564477
NCBI-ProteinID:
XP_009265360
UniProt:
I6ZKM9
LinkDB
All DBs
Position
X:50611..52332
Genome browser
AA seq
573 aa
AA seq
DB search
MKLEPGTVEALYNSQTNNPLYKNPILQITSLGKLSVAIGDKQRYRVNLSDGVSYMKGIFS
SELTPHFEKGLVSKYSLIKPGRFSVRSKDGSVYIYIQEIQEYEDCNVEIGKPVNISTGNA
SFSDNQPSPGNPRRIEGSNQQHCRPTDEGDKKRVRRDADDEGEFVAINMLNPFYNKWTIK
GRVVVKSDIRRFTNHKGEGKVFNFEISDGTAQVKIICFSDCVDIFFPIVEVGKVYIISKG
TVKTANKQYSTNPFDYEIILDKGSEVRCAADDGSPRYFFNFVKISDLSLGSTYCDVIGVV
KEVYSPSTVMIRSTQNELLKRDAILVDESGSVRLTLWGPKAEIDIEGGMVLGLKSIKVSE
FNGITISTTGGSQVVVNPDIPEAHELAGWYQSIGKDMQVSLPRKEEKRRLIQEVKENELA
YSTIQGTVMFLKEDALWYTSCKGEGCNKKVAMEESGNYRCERCNMTYEDCNYRYMVSMHL
GDFTGQIWVSLFDEAASGFFGISAREMKEMSEESPTELQTLIRRMYFRECLFRIKSKQDS
YNDELRMRYSGLNVITLDILKESKRLLDVIEKV
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgaaccaggaacggtcgaagctctttacaacagtcagactaataatccgctg
tacaagaatcccattctccagattacatctctagggaaattatcagttgctattggggac
aagcaaagatatcgagtcaacctatctgacggagtaagctatatgaaggggattttttcc
agtgagctcacacctcactttgagaaggggctcgtgagcaaatacagcctgattaagcct
ggaaggtttagtgtaaggtcaaaagatggcagcgtgtacatatacatccaggagatccag
gaatacgaagactgtaatgtcgagattgggaagcctgtcaacataagtactggaaatgca
tcttttagtgataatcagccaagcccgggaaatccaagacgtatagaagggagcaaccag
cagcattgtaggcctacagatgagggggataaaaaaagagtaaggagagatgctgatgat
gaaggagaatttgtagcgataaacatgctgaatccattttacaataagtggacaataaag
ggaagagtggtagtgaagagtgatataagaaggtttaccaaccacaaaggggaaggaaaa
gtatttaattttgagatttcggatggaactgcacaagtaaaaataatatgcttttcggat
tgtgtggacatattctttccgatagtggaggttggaaaagtgtacattatctcaaaggga
actgtaaagacggcaaacaagcagtattccacaaacccctttgactatgaaataatcttg
gacaaaggctcggaagttaggtgtgctgccgatgatgggtcacctcgatatttcttcaac
tttgttaagatttcagatctatcgctcgggagtacctattgtgatgtaattggggttgtc
aaggaagtgtacagcccttcgactgtgatgattaggagcactcagaatgaactcctcaaa
agggatgccattcttgttgatgaaagtgggagtgtgaggttaacgttatgggggccaaag
gctgagattgatattgaaggaggaatggttctcggactaaagtctatcaaggtcagtgaa
tttaacggaatcacgatatcaactaccggaggatcacaggttgtagtgaacccagatatt
cctgaggcacatgagcttgcaggatggtatcaatcgattggcaaagatatgcaggtatct
ctcccccggaaagaagaaaagaggagattgatacaggaagtcaaggaaaacgagctggcc
tattcgacgattcaagggacagtaatgttcctgaaggaagatgcactgtggtacacatca
tgcaagggtgagggatgcaacaagaaggtcgcgatggaggaaagtgggaactacaggtgt
gagagatgcaacatgacatatgaggactgtaattacagatatatggtcagtatgcatctt
ggagatttcacagggcagatatgggtgagcctctttgatgaggcggcatcaggattcttt
ggaatatctgcgagggagatgaaagagatgagcgaagagtctcctactgagctacaaaca
ctaattagaaggatgtatttcagggaatgcctattcagaattaagtcgaagcaggatagc
tacaatgatgagcttagaatgagatacagcggattgaatgtaatcaccctggatatattg
aaggagtcaaaaaggcttcttgatgtgattgagaaggtataa
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