Encephalitozoon romaleae: EROM_100560
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Entry
EROM_100560 CDS
T03458
Name
(RefSeq) DEAD box ATP-dependent RNA helicase
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ero
Encephalitozoon romaleae
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ero03009
]
EROM_100560
Enzymes [BR:
ero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EROM_100560
Ribosome biogenesis [BR:
ero03009
]
Eukaryotic type
Pre-60S particles
Helicases
EROM_100560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
AAA_19
CMS1
AAA_22
Motif
Other DBs
NCBI-GeneID:
20564486
NCBI-ProteinID:
XP_009265369
UniProt:
I7ATR4
LinkDB
All DBs
Position
X:complement(72266..73648)
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AA seq
460 aa
AA seq
DB search
MYVKGVEDVCMNSRLKKEVGANGFGEMTDVQRMCVPEMLKGKDVVVQSPTGTGKTMAFLI
PILSCIYDGKGSGNLDVVAMIITPTRELAMQIKEVAELFDVRCECFIGGMNIEKDYERMK
GEFSIVVGTPGRLLEIVSKDIKKFSRIRHVVLDEADKLLGFGFEEKLMQLIKKLPKNRVT
GLFSATINDSVDKLSRASLRNPVSINVGNSAMPVALEYVILSPMEKLFALIDIVNGRRCI
IFFATCNQVDFFFGLLSRIGLENIYKIHGKISQDERNKVYKEFCQGNSLLFCTDVAARGI
DFRDVDLVVHFDVPKEYSNIVHRSGRTARNGCKGESILFVMPNEKAYTEFLKLKGIPVVE
SSYRMKPTISYDDVKSKIDSNLLSLSVKAFVSYIRSYKEHFASYILDYKGLDFDSLAELF
FLEKIPGMAELRNVRFAKFAKPPEGGRKREKPKRKYKRKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcaagggagttgaggatgtttgtatgaacagtaggttgaagaaggaggttgga
gcaaatggatttggagaaatgactgatgtccagcggatgtgtgttcctgagatgctaaaa
ggaaaagatgtggtggttcaatcaccaacagggacaggaaagaccatggcgtttcttatt
ccgatactcagttgcatatatgatggaaaagggagtggaaatctggatgttgttgcaatg
attatcacacccactagagagcttgccatgcaaattaaagaggtggcagaactgtttgat
gtgaggtgtgaatgctttataggtggaatgaatatagaaaaggactatgagagaatgaaa
ggagagttttccattgttgttggaacgcctgggagacttttggagattgttagtaaggat
ataaagaagttctcgaggatcaggcatgtcgttcttgatgaggcagacaagctactaggg
tttggatttgaggagaagctgatgcagttgattaagaagcttccaaaaaacagggtcaca
ggattgttttctgcaacgatcaatgactcggtagataagctctcgagagcttctctgaga
aaccctgtcagtatcaatgtggggaatagtgcaatgcctgttgctcttgagtatgttatt
ctaagtcctatggaaaagctgtttgctctgatagacattgtgaatggtagaagatgcatt
attttctttgcgacatgcaatcaggttgatttcttttttggcttactttcaagaattggt
cttgagaacatatacaagatccacgggaagatatcccaagacgaacgaaataaagtttat
aaagagttctgccaaggaaatagccttctcttttgcacagatgttgctgcaagggggata
gacttcagagatgtagacctggttgtgcacttcgatgttccaaaagaatatagtaatata
gtccatagaagtggtaggactgccaggaatggatgtaaaggagagtctattctatttgta
atgccaaatgaaaaggcttacacagaattcctaaagcttaagggtattcctgtggtggaa
agtagctacaggatgaagcccactatttcttatgatgacgtaaagagtaagattgattca
aacctcctaagcctttccgtgaaggcttttgtgtcatacataaggtcatacaaagaacac
tttgcatcatacatattagattataaaggtctggacttcgattctctggcagagcttttc
tttttagagaagatacccgggatggctgagctaaggaatgttaggttcgcgaagtttgcc
aaacctccagaaggcggaagaaaaagagaaaaacctaaaaggaaatataaaagaaagaaa
taa
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