Encephalitozoon romaleae: EROM_100780
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Entry
EROM_100780 CDS
T03458
Name
(RefSeq) putative beta-lactamase fold-containing exonuclease
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ero
Encephalitozoon romaleae
Pathway
ero03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EROM_100780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ero03021
]
EROM_100780
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_100780
Transcription machinery [BR:
ero03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EROM_100780
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EROM_100780
U7-dependent histone pre-mRNA processing factors
EROM_100780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
RMMBL
CPSF73-100_C
Beta_lactamase3
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
20564508
NCBI-ProteinID:
XP_009265391
UniProt:
I7APT9
LinkDB
All DBs
Position
X:complement(<99914..>101845)
Genome browser
AA seq
643 aa
AA seq
DB search
MFSNEKIKIMPLGAGNEVGRSCVIVECGGRTIMLDCGVHPAYTGVASLPFLDLVDLSKID
AIFITHFHLDHAAALPFLTEKTSFKGKVYMTHPTKAILKWLLNDYIRLINAASDADFYTE
SDLIKCYDRIIPIDYHQEVNVKGIKVKALNAGHVLGAAMFLIEIEKSKVLYTGDFSREED
RHLKAAESPGCKIDGLITESTYGVQCHLPRAEREGRFTSIVQNVVQRGGRCLLPVFALGR
AQELLLILEEHWNSNTSLQKIPIYYASALAKRCMGVYQTYIGMMNERIQKLSLVRNPFAF
KYVKNLKGIDSFDDEGPCVIMASPGMLQSGLSRDLFERWCSDSKNAVIIPGYCVDGTLAK
EILSEPKEIEALNGKKLRLNMSVEYISFSAHVDFTQNSQFIEECQPKHLFFVHGEMNEMQ
RLRNVIQQRNEKKGIEMILYTLRNGEEAEFDLVKDNEAKIFTNVEGEFEGIIVGTEDDIR
IYKRDELIESKYKEMNIYERQRIPYNSTAVLLKQVLMDGFSELVEVESGFMIGNVHVKLD
GQEVVLEWKSSYADDVLAISISKMISGIGLKTKSVKLSKMGKEELLISVLKNYFVIEKDG
DIVKVKNGSKEAYISRDGVTGDSSVVDKIDECMRKIKVIYSEV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaatgagaagataaaaataatgcctcttggggcaggaaacgaggttgggagg
tcgtgtgttattgttgaatgtggtgggaggactataatgctggactgtggggttcatcct
gcatacactggggtggcctctctcccctttctggatcttgtggacctttctaagattgat
gccatatttattacacacttccacctggatcatgctgctgccttaccgtttctaacggag
aagacaagcttcaagggaaaggtctacatgacacaccctacaaaagccattcttaaatgg
ctcctgaacgactatatcaggctaattaatgcagcgtcggatgcagatttttacacagaa
agtgatttgatcaagtgttacgacaggatcataccgattgattaccaccaagaagttaat
gtgaaaggaattaaagtcaaagcactgaatgcagggcatgtactaggggcagccatgttt
ttgattgaaatagagaaaagcaaagttctttacacgggggatttcagtagagaggaggat
aggcatcttaaggcagccgagtcacctggatgcaaaatagatggattaataacagagtct
acatacggtgtgcagtgccacctcccaagggctgaaagagaagggaggtttacaagtatt
gtccagaatgttgttcaaaggggtggtagatgcctacttcctgtgtttgctcttggaagg
gcacaagaactacttctcattcttgaagagcactggaattcgaatacttcgttacagaag
attcccatatattatgcatctgcactagcaaagagatgtatgggggtgtatcaaacatac
atagggatgatgaacgagagaatccaaaagttgagccttgtccgaaatccttttgcgttc
aagtatgtcaagaatctgaaggggatagattcgtttgatgatgaggggccgtgtgtaata
atggccagtcccgggatgctccagagtgggctctcaagagatctttttgagcggtggtgt
tctgacagcaaaaatgcagtgataatacctgggtattgtgtagatggaacacttgcaaag
gagatacttagtgagcctaaggagatagaagcattgaatggaaagaagcttcggcttaac
atgtctgtagaatatatttcgtttagtgcacatgtggatttcacacagaacagtcagttt
attgaggagtgccaacccaagcatcttttctttgtgcatggcgagatgaatgagatgcag
aggcttaggaatgttattcaacaaagaaatgagaagaaggggattgagatgatactttat
actcttcgaaacggggaggaggctgagtttgacctagttaaggacaacgaagcaaagata
tttactaatgttgaaggagagtttgaagggattattgtaggaacagaggacgacatcagg
atatacaagagagatgaattaatagagtctaaatacaaggagatgaatatatatgagaga
caaaggattccgtataactctacggctgttctattgaagcaagttctcatggatgggttt
tcagagcttgttgaggttgagtctgggtttatgataggaaatgtccatgttaagttagat
ggacaggaggttgtgcttgaatggaaaagtagttatgcagatgatgttttggcgatatct
ataagtaagatgatatctgggattggactgaaaacgaagagtgttaagctgagcaagatg
ggaaaggaggagcttttgattagtgttttgaagaattattttgtgattgagaaggatgga
gatattgtgaaggtcaagaatgggagcaaggaggcatatatcagtagggatggagtaact
ggagattcttctgtagttgataagatagatgaatgcatgcgaaagataaaggtgatatat
tcagaagtttag
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