Encephalitozoon romaleae: EROM_101230
Help
Entry
EROM_101230 CDS
T03458
Name
(RefSeq) Rrp4-like RNA-binding protein
KO
K03679
exosome complex component RRP4
Organism
ero
Encephalitozoon romaleae
Pathway
ero03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EROM_101230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_101230
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EROM_101230
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
EROM_101230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
RRP40_S1
KH_6
Motif
Other DBs
NCBI-GeneID:
20564553
NCBI-ProteinID:
XP_009265435
UniProt:
I6ZKU6
LinkDB
All DBs
Position
X:complement(162028..162705)
Genome browser
AA seq
225 aa
AA seq
DB search
MKALFLPGEEVLESDGYIRGHGTQLKDSHIVSTYFGKVRITNKLVAIDPVFPMKYTPEVG
NVVIGRVVGIHNKKWKIDLNSRSDVYLGLSAINLPGAVQRRKQESDEMSMRSFFDINDLV
VSEIQKVNRNGTAALHTRNDRYGKLSKGLLVFVPHFLLEPLKTRFLFNDSIKVIAGCNGY
IWIGRRHEDPAEFVEVAKVVSKVKEMASQNRSINMEKILGKEAQH
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccttgtttctacctggggaggaagtgctagagagtgatggatatataagaggc
catggaacacagctcaaagacagccatatagtgtcgacatactttgggaaggtaaggatt
actaacaagcttgtagccatagatcccgtgttccctatgaaatacaccccggaggttggt
aatgttgttataggtagggttgtcgggattcataacaagaagtggaagatagacctaaac
agcagatcagatgtttatctaggactgtctgcgatcaatcttcctggagcggtccagcgc
cgtaagcaggagtccgacgagatgtccatgaggagcttttttgatatcaacgatcttgtt
gtgtctgagatccagaaagtcaatagaaacggcactgcagcactgcatacaagaaatgat
aggtatgggaagctaagcaagggactcttagtatttgtgccccacttcctgcttgaacca
ctcaaaaccaggtttctttttaatgatagcattaaagttattgctggatgtaatggatat
atatggattgggaggaggcatgaggaccctgcagaatttgtagaggtggccaaggttgtt
tctaaggtgaaggaaatggcatctcagaatagatctatcaacatggaaaaaatacttgga
aaggaagcacaacattaa
DBGET
integrated database retrieval system
