Encephalitozoon romaleae: EROM_111950
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Entry
EROM_111950 CDS
T03458
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
ero
Encephalitozoon romaleae
Pathway
ero03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EROM_111950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_111950
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EROM_111950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH_C
RNase_PH
Motif
Other DBs
NCBI-GeneID:
20564794
NCBI-ProteinID:
XP_009265673
UniProt:
I6ZWM6
LinkDB
All DBs
Position
XI:complement(230813..231493)
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AA seq
226 aa
AA seq
DB search
MEGFSQDELEFVRNGIAKGHRSDLRKSKEERKAHVICSSIAQGDGSVRVKRGWSEIEISI
QFKETPETLGASNVPGEILGSNELYMESIEFSKIAIPKIITSKILELLSSYKVGIRVEFS
ILSNDGNIYDLFFIGLSTLFKELEVPVIEDLRKTVKREIDIPVSKTVALFNNGYFVVDPT
MIEEEASCGLMHVFISNEGKLMGCLSEGNCDIDQEVFVNIIKEISI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctttagtcaggacgaactggaatttgtgagaaacggaatagctaaagggcat
cgatcagatctaaggaagagcaaagaagaaagaaaggcacacgtcatttgctcatctata
gcacagggcgatggaagcgttagggttaaacgtggatggtctgagatagagatatccatt
caattcaaagaaacacctgaaaccttaggggcttctaatgtacctggagaaatccttggt
agtaacgagctgtatatggaatccatagagttctctaaaattgccattccaaagattatt
acttcgaagatcctcgagctactatcttcatataaagtagggataagagtagagtttagc
atattaagtaatgatggaaacatatatgatttgttttttattggacttagtacgctattt
aaagaattggaagtgcctgttatagaagatttgagaaaaacagtaaagcgagagatagac
atcccagtttcaaaaactgttgctttatttaacaatggttactttgtagtggatccaaca
atgatagaggaggaagcatcatgtggattgatgcatgtatttattagcaatgaaggcaaa
ttgatgggatgtttatctgaaggaaattgtgatattgatcaggaagtattcgtaaatatt
ataaaagagatttctatctaa
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