Erwinia rhapontici: LJN55_00455
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Entry
LJN55_00455 CDS
T08392
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
erp
Erwinia rhapontici
Pathway
erp00040
Pentose and glucuronate interconversions
erp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LJN55_00455
Enzymes [BR:
erp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
LJN55_00455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
UDQ80377
LinkDB
All DBs
Position
106217..108292
Genome browser
AA seq
691 aa
AA seq
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MWERQLCIITLSLGLSAPVAAALPEPGTLVWHSITFGQSTDVNFATNVLADKIGRNETLL
AGGKAVPAEGSLLTTPFTLESRGGKVGNSHDGLTYFYTRLPADANFLLEADITLNQFGPE
NGAKPAGQEGAGLLVRDILGPARAPVVQPGIEELPAASNMVMNTVMAIGDKPPAVALVAR
QGVLQPWGNTGIGIVREPYQSLTTPQHFSLRLSRTDSGFEVAYAPQGSSAWSSKAVAGAD
RITQLDKTQYYVGFFASRNASITVNHATLTLSEAHTQPGAPYVAPVLPSRIEVMSSPRLT
RRDGVFQLRTNGNGLITIERGDTVLLRQKRVRGGDVVALPVKATSMPRDLKVTFTPDNGQ
RLTQTYPLSLAQVSHPDTLYASAEGAADNDGSREHPLDVASAVNLLAPGGTLWLAESEYP
ATVIPATASGTGQHRKMLRPLGDNVVFNGLTLNASYWHIQGITVTKKSFHIAGSHNHIDR
VRAHHADDTGIWVASPDGIGRALWASHNLISNAESWGNQDPGRKNADGFAVKMRVGEGNH
LVNCYSHDNIDDGFDLFNKIEDGPNGSVTIENSLSVNNGSNGFKLGGEGLPVAHVARNNM
ALNNGMDGFSDNFNPGALMIAGNRALDNQRFNFLFRPSPYTTPEKQGTFSGNISLRTVPG
KYDDVVSGNTDDTNVFYHVKTSELIKSTIQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaacgtcaactctgtattatcacgttgtccctcgggctgagcgcgcccgttgcg
gcggcgctgccggagcctggcacgctggtctggcacagcatcaccttcggtcagtcgacc
gacgttaattttgccaccaacgtactggcagacaaaatcggccgcaatgaaactctgctg
gccgggggtaaggcggtgccggcagaaggcagcctgctcaccacgcccttcacgctggaa
agccgtggcggcaaggtgggcaacagccacgatggtctgacgtatttctatacgcgctta
ccggcggacgccaatttcctgctggaagccgatatcacgctgaatcagttcggcccggaa
aacggggcaaaaccggccgggcaggaaggcgcgggattgctggtccgcgatattttaggc
cctgcccgcgcgcccgttgttcagccgggcatcgaagagttaccggccgcctcgaatatg
gtgatgaatacagtgatggcgatcggtgacaagccgcctgcggtggcgctggtggcccgt
cagggcgtgctgcagccctggggcaataccggcatcggcattgtgcgtgagccctatcaa
tctctgaccacgccacagcatttttcactgcgtctgagccgcaccgacagcggatttgag
gtggcgtatgccccccagggcagcagcgcatggagcagcaaagcggtcgcgggtgcagac
cgtatcacccaactggataaaacgcagtattacgtcggcttctttgcgtcacgtaatgcc
agcatcacggtgaatcacgccacgctgacgctcagtgaggcacatacgcagcccggtgcg
ccgtatgtcgcgcctgtgctgccatcgcgtattgaagtgatgtcatcccctcgcctcacc
cggcgtgacggcgtgttccagctgcgcaccaacggcaacggtctgatcactatagaacgt
ggtgacaccgtgctgctgcgccagaaaagagtgcgtggcggcgacgtggtggcgctaccg
gtgaaggccacatcgatgccgcgcgatctcaaggtcacctttacaccggataacggccag
cgtctgacgcaaacgtacccgctaagcctggcgcaggtcagtcatccggatacgttatac
gcttccgcggagggggctgcggataacgatggctcacgtgaacatccgctggatgtggcc
agtgccgtcaatctgctggcgccgggcggcacgctgtggctggcagagagcgagtatccg
gccacggtgatccctgccacggccagcggcaccgggcagcaccgtaaaatgctgcggccg
ctgggcgacaacgtggtgtttaacggtctgacgctcaatgccagctactggcatattcag
ggcattaccgtcacgaagaaaagtttccatattgccggcagtcacaaccatatcgaccgc
gttcgtgctcatcatgccgatgataccggcatctgggtcgcctcaccggatggcatcggc
cgcgcgctgtgggccagccataatctgatcagcaacgctgagtcctggggtaatcaggac
ccggggcggaaaaacgctgacggttttgcggtgaaaatgcgtgtcggtgagggcaaccac
ctggtgaactgctattcccacgacaatattgatgacggttttgacctgttcaacaaaatt
gaagacggcccgaacggcagcgtcaccatcgaaaacagtctgtcggtaaataacggcagc
aacggcttcaaactgggaggcgaagggctgcccgtggcacatgtggcgcgcaacaacatg
gcactgaacaacggcatggatggcttcagcgataacttcaatcctggcgcgctgatgatt
gcaggcaaccgggcgctggataaccagcggtttaacttcctgttccgtccgtcgccttac
accacgccagagaaacagggcacgtttagcggcaatatttctctgcgtaccgtgccgggg
aaatatgacgatgtggtcagcggtaataccgatgacacgaatgttttttatcacgtgaaa
acgagtgaattaatcaaaagtacgatccaaaaataa
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