KEGG   Erwinia rhapontici: LJN55_00860
Entry
LJN55_00860       CDS       T08392                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
erp  Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:erp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:erp02044]
    LJN55_00860 (tssC)
Secretion system [BR:erp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LJN55_00860 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UDQ80451
LinkDB
Position
complement(207285..208784)
AA seq 499 aa
MSTQTVKNEKPAVATTSYSDFNTLLTKEFKPKSEQAKSAVASAVKTLAEQALANSLTIAD
DAYKNIAVYIAEIDRKLSEQINLILHHEKFQSLESAWRGLHYLVNNTETDEKLKLRFMDI
SKNELRRNLKRYKGIAWDQSPLFKQVYEEEYGQLGGEPYGCLVADYYFDHTAPDVDLLAS
IAKISASAHSPFITGAAPSVLQMESWQELANPRDLTKIFTQNLEYAAWNSLRNSEDSRYI
GLAMPRFLSRLPYGIRTNPVDAFDFEETTDGADHSKYTWSNAAYAMAVNINRSFKHYGWC
TLIRGVESGGVVEDLPCHTFPTDDGGIDMKCPTEIAISDRRESELAKNGFIPLIHRKNTD
YAAFIGAQSLQKPAEYYDPDATANANLSARLPYMFACSRFAHYLKCIVRDKIGTFKERDD
MQSWLNDWIMNYVDGDPNNSSMDTKARRPLAAAEVVVEDVEGNPGFYQAKFFLRPHFQLE
GLTVSLRMVAKLPSLKGSN
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgtcaactcaaactgtaaaaaatgaaaagccggctgtagcgacaacctcctatagcgac
ttcaatactcttttgacaaaagaatttaagcctaaatctgaacaggcgaaatctgctgtt
gcatcagcagtcaaaacattggctgaacaagcgctggcgaactctctgacaattgctgat
gacgcatataagaatattgctgtctacatcgctgaaattgacagaaagctctcagagcag
atcaacctgattcttcatcatgaaaagttccagtcgctggaaagcgcgtggcgtggactg
cattatcttgtcaataatactgaaacagatgaaaagctgaaacttcgttttatggatata
tctaaaaacgaactgaggcgtaacctgaaaagatataagggaattgcctgggatcagagt
cctttgtttaaacaggtttatgaagaggaatacggtcagctgggtggtgagccttatggt
tgtctggttgcggactactattttgatcatacggcacccgatgttgatctgctggcatca
attgctaagatttctgcttcagctcactccccattcatcacgggtgctgccccatcggtg
ctgcaaatggagtcatggcaagaactcgccaacccgcgtgatttgacgaaaattttcacg
caaaacctggaatacgcagcatggaattcactacgtaattctgaagactcacgctacatc
ggcctcgcaatgcctcgattcctgtcacgtctcccttacggaattcgcacaaatccggta
gatgcttttgactttgaggaaacaacggacggagctgatcatagcaaatatacgtggtcg
aacgcagcttacgccatggcagtcaatattaaccgttcatttaaacactacggatggtgc
accttgattcgcggcgttgagagtggcggtgtagtggaagatcttccgtgtcatactttc
cctacagatgacggcggcatcgacatgaaatgccctacggagattgcgatttccgatcgc
agggaatctgaactggctaaaaatggtttcattccattaattcatcgtaaaaatacagat
tatgcggctttcattggagcccaatcactgcagaaacctgctgaatattacgatccagat
gcaaccgcgaacgctaatctttcagcacgacttccttatatgtttgcctgttcacgcttc
gcgcattacctcaaatgtattgtccgcgacaaaattggtacatttaaagaacgtgatgat
atgcagagttggttgaacgactggataatgaactacgtcgatggcgatccaaataactcg
tcgatggataccaaagcgcgtcgtccattagcagcagctgaggttgttgtagaagatgtt
gaaggaaatccagggttttatcaggcaaaattcttcctgcgccctcatttccaacttgaa
ggtctgactgtgtctttacgtatggttgctaaactaccttcacttaaaggctctaactga

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