Erwinia rhapontici: LJN55_01035
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Entry
LJN55_01035 CDS
T08392
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erp03000
]
LJN55_01035
Transcription factors [BR:
erp03000
]
Prokaryotic type
Helix-turn-helix
Other families
LJN55_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
PAS_4
PAS
AAA
Mg_chelatase
ATPase
PAS_8
AAA_3
Diguanyl_cycl_sensor
HTH_50
GAF_2
MCM
Glyco_trans_4_4
UPF0175
AAA_2
HTH_29
nSTAND3
IstB_IS21
sCache_3_3
Motif
Other DBs
NCBI-ProteinID:
UDQ80481
LinkDB
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Position
complement(244873..246849)
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AA seq
658 aa
AA seq
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MNQPTLAGAINAECDGQLSLPAGSEASRWDSLLEQARRDFDAGREPEFVRPDVLSSWKSS
RAAGIDPAYFAYTFPPEERVKQILADNAELIEVAGSIMENLLAYNPDGHINLTNAQGVTL
SCCGRDLTPIGSILTESEMGTNCTARCLKQQRLVYMLNGENWKAALRERHLQCAAAPIRD
AEGRMIGVLTLTASQDNFHYHTLGTVQAAAEAIGQQLILRALLAEQKSILETLNEGVIVL
DRSGVIKTINRYARQIFHGLARAGHQVDAVLNPEHTRLATMTFCNDREIVFSPAENQRVC
CLVSVMPAPGGGKIIALRENQRIRAITRRVMGASASYTFDMLCGSAPALQVAMDKARSCC
RSDSTVLLTGESGTGKELFAQAIHNGSLRCGEPFIAVNCGALPRDLVQSELFGYMDGAFT
GSRRGGAAGKFELAEGGTLFLDEIGDMPLEAQTSLLRVLQESEVVRIGASQPVKVNVRII
AATNCNLIRAVETGAFRRDLYYRLNVISIRIPALRERSSDIPALTEWFREKVCTQLKKIN
VQFTAGAMDALSHYHWPGNVRELENIVERVINMNDGLFIDVPDLPDEVIRRTSSTHAAHL
AEPQQAVRLDVNERAHIISTLDALNGNLRQAAQLMGLSRAGLYNKLKKYQISADEFRR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaccgacgttagccggtgcgatcaacgcagagtgtgatggacaactaagcctg
cctgcgggcagtgaagccagccgctgggacagcctgctggaacaggcgaggcgggatttt
gatgccgggcgcgagccggagtttgtccgcccggatgtcctcagttcatggaaaagcagc
cgtgctgccgggatcgatcctgcgtattttgcttacaccttcccacccgaggaacgggtc
aaacagattctggccgacaatgccgagctgattgaggtggcgggcagcattatggaaaat
ctgctggcctataacccggacggccacattaatctgaccaatgcgcagggggttacgctc
tcctgctgcggtcgcgatctgaccccgataggcagcatcctgaccgaatcagagatgggc
accaactgtaccgcgcgctgcctgaaacagcagcggctggtgtatatgctcaacggtgaa
aactggaaagcggccttgcgtgagcgccatctgcaatgtgctgccgcgcccatccgcgat
gctgagggacggatgatcggcgtactgacgctgaccgccagccaggacaatttccactac
catactctcggtaccgtgcaggcggccgccgaagcgatcggccagcagctgatcctgcgt
gcgttgctggcggaacagaagtcgatcctcgaaacgctgaacgaaggggtgatcgtgctc
gatcgctcaggggtgatcaaaaccatcaaccgctatgcccgacagatcttccacggactg
gcacgcgccggccatcaagtggatgcggtactgaacccggaacatacgcgcctggcgacc
atgaccttctgcaacgaccgagaaatcgtcttcagccctgccgagaatcagcgcgtctgc
tgcctggtatcggtgatgcccgcgccaggcggcggtaagattatcgccctgcgagagaat
cagcgtatccgcgccattacccgccgggtgatgggggcgagcgccagctatacctttgac
atgctatgcggcagcgcaccggctttgcaggtcgcgatggataaagcccgtagctgctgt
cgcagcgacagcaccgtgttactcaccggagagagcggcaccggcaaggagctgtttgct
caggcgatccataacggcagcctgcgttgcggcgagccttttattgctgttaactgcggt
gcgctgccgcgcgatctggtacagagtgagctgtttggttatatggacggtgcgtttacc
ggatcgcggcgcggcggtgccgcaggtaagttcgaactggcagaaggcgggacgctgttt
cttgatgaaattggcgatatgccgctggaagcgcagaccagcctgctgcgcgtattgcag
gagagtgaagtggtgcgcattggcgcgtcgcagccggtgaaagtcaatgtccgtattatc
gctgccaccaactgcaatctgatccgggcagtggaaaccggcgcgtttcgccgcgacctc
tactaccgcctgaacgtgatttctattcgcattcccgccctgcgcgaacgcagcagcgat
attccggcgctcaccgagtggttccgcgaaaaagtctgcacccagctgaaaaagatcaac
gtgcagtttaccgccggggcaatggacgctttaagccactaccactggccgggtaacgtc
cgtgagctggagaacattgttgagcgggtgatcaatatgaacgacggactgtttattgat
gtgccggatctgcccgatgaagtcatccggcgcacgtcctccacccatgcggcccatctc
gcggagccgcagcaggccgttcggcttgatgtgaatgagcgcgcgcatattattagcacg
ctggatgcactgaacggcaatctgcgccaggcagctcagttaatggggctgtcacgcgcc
gggttatataataaactgaagaaatatcagatcagtgctgacgagtttcgccgctga
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