Erwinia rhapontici: LJN55_01515
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Entry
LJN55_01515 CDS
T08392
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erp03021
]
LJN55_01515 (rpoH)
Transcription machinery [BR:
erp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LJN55_01515 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
KORA
UCR_14kD
HTH_3
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UDQ80571
LinkDB
All DBs
Position
356924..357778
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AA seq
284 aa
AA seq
DB search
MTKEMQTLAIAPLGNLDAYIRAANAWPMLTAEEEKALAEQLHYQGDLEAAKTLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKAKQRLGWFNQEEVEMVARELGVSSKDVLEMESRMAAQDM
TFDPTPDDEGEGRSMAPMLYLQDKSSDFANGIEEDNWDDHAADKLSDAMLGLDERSQHII
RARWLDDDNKTTLQELADQYGVSAERVRQLEKNAMKKLRLAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctattgctcccttaggcaacctggatgcgtacatc
cgggcagctaatgcctggcctatgctgacggcagaagaggaaaaagcgttggctgaacag
ctgcattaccagggcgatctggaagcagctaaaacgctgatcctgtctcacctgcgcttt
gtcgttcatgttgctcgtaactattctggttatggcctgccgcaggcagacttgatccag
gaaggtaacatcggcctgatgaaagctgtgcgccgttttaacccggaagtaggggtgcgc
ctggtgtcctttgctgtgcattggatcaaagccgaaattcatgaatacgttctgcgtaac
tggcgtattgtgaaagttgccaccaccaaagcacaacgtaagctgttctttaacctgcgt
aaagctaagcagcgtttgggctggttcaaccaggaagaagtcgaaatggtggcgcgtgaa
ctgggcgtcagcagcaaagacgtgctggaaatggaatcgcgcatggccgcgcaggacatg
acctttgacccaacgccggacgacgaaggcgaagggcgttcaatggcgccgatgctctac
ctgcaggataagtcttccgactttgcgaatggtattgaggaagataactgggacgatcac
gcggcggataagctgagtgatgcgatgctggggctggacgaacgcagccagcacattatc
cgtgcccgctggcttgacgatgacaacaaaaccaccctgcaggagctggccgatcagtac
ggcgtttccgcagagcgtgtgcgtcagcttgaaaagaacgcgatgaagaaactgcgtctg
gcgattgaagcatag
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