Erwinia rhapontici: LJN55_02155
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Entry
LJN55_02155 CDS
T08392
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
erp
Erwinia rhapontici
Pathway
erp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LJN55_02155 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erp03021
]
LJN55_02155 (rpoA)
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_02155 (rpoA)
Enzymes [BR:
erp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LJN55_02155 (rpoA)
Transcription machinery [BR:
erp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LJN55_02155 (rpoA)
DNA repair and recombination proteins [BR:
erp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LJN55_02155 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UDQ80693
LinkDB
All DBs
Position
481606..482595
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactcttggt
aacgcactgcgccgtattctgctttcatcaatgccgggttgcgcggtgaccgaggttgaa
attgatggtgtactgcacgagtacagcaccaaagagggcgtacaggaagatatcctggaa
atcctgctcaacctaaaaggtttggcggtaagagttcagggcaaagatgaagttattctt
actctgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggggat
gtcgaaatcgtcaagccgcagcacgtgatctgtcacctgaccgatgaaaacgccgctatc
agcatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaattggtcgtctgttggtcgatgcctgctacagccctgta
gagcgaattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgatttggacaag
ctggtcatcgaaatggaaactaacggtactatcgatcctgaagaggcgatccgccgtgca
gcgaccattctggctgaacaactggaagctttcgtcgacttacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcttgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgcttaaaacgcctaaccttggtaaaaaatctctt
actgagattaaagatgtgctggcttctcgtggtttgtctctgggcatgcgcctggaaaac
tggccacccgctagcatcgctgatgaataa
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