Erwinia rhapontici: LJN55_02745
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Entry
LJN55_02745 CDS
T08392
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
erp
Erwinia rhapontici
Pathway
erp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LJN55_02745 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erp03019
]
LJN55_02745 (pnp)
03016 Transfer RNA biogenesis [BR:
erp03016
]
LJN55_02745 (pnp)
Enzymes [BR:
erp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LJN55_02745 (pnp)
Messenger RNA biogenesis [BR:
erp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LJN55_02745 (pnp)
Transfer RNA biogenesis [BR:
erp03016
]
Prokaryotic type
tRNA degradation factors
LJN55_02745 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
aRib
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
S1_RRP5
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
UDQ80795
LinkDB
All DBs
Position
597391..599526
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVKKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGRKTPKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPLRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVALIGASAALALSGLPFNGPIGAARVGYLNDQYVLNPTTDELTESKLDLVVA
GTKGAVLMVESEAELLSEDQMLGAVVFGHDQQQIVIDTINELVAEAGKPRWDWTPEAVNE
ALHARIAALAEARLSDAYRITEKQERYNQVGVIKSETTAALLAEEETLDAGEISDILHTL
EKNVVRSRILRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGERTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKGDA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKDNDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQEALNQAKGARLHILSVMEQA
ISTPRGDISQFAPRIHTIKISVDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEASEQAQPEAEAPAAPAPEAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgtcaaaaaattccagtatggtcagcacaccgtcacacttgagacc
ggtatgatggcccgccaggcaacagcagccgtaatggtaagcatggacgacaccgcagtg
ttcgtcaccgttgtaggccgcaaaacgcctaagccaggccaggacttcttcccactgact
gttaactaccaggagcgtacttatgctgctggtcgtatcccgggcagtttcttccgtcgc
gaaggtcgtccaagcgaaggcgaaacactgacctctcgtctgattgaccgtccgcttcgc
ccactgttcccggaaggcttcgtaaacgaagtgcaggttatcgcgaccgttgtttctgtt
aacccacaggttaacccggacatcgttgcgcttatcggtgcttctgctgctctggcgctg
tctggcctgccattcaacggtccaatcggtgcggctcgcgtcggttacctgaatgatcag
tacgtactgaacccaaccaccgacgaactcacagagagcaagctggacctggtggttgcc
ggtacgaaaggcgcagtgctgatggttgagtctgaagctgagctgttaagcgaagatcag
atgctgggtgcggtggtgtttggccacgaccagcagcagatcgttatcgacaccatcaac
gaactggtcgctgaagcaggcaaaccgcgttgggactggacgccagaagctgtcaacgaa
gcgttacacgcgcgtattgctgcactggctgaagctcgtttgagcgatgcgtaccgcatc
actgaaaaacaggaacgttacaaccaggttggcgtgatcaaatctgagaccacagcagca
ctgctggcggaagaagagaccctggacgctggcgaaatcagcgacatcctgcacacgctg
gagaagaacgttgtgcgtagccgcattctgcgcggtgagccacgtatcgatggccgtgaa
aaagacatgatccgtggtctggatgtgcgtaccggcgttctgccacgtactcatggttca
gcactgttcacccgtggtgagactcaggcactggttaccgcaacgctgggtactgcccgt
gatgcgcagaaccttgacgaactgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccgtactctgtcggtgaaaccggtatggtcggttcgcctaagcgtcgtgaa
attggtcacggtcgtctggcgaaacgcggtgtgctggcagtgatgccaaaaggcgatgcg
ttcccgtacaccgtacgcgttgtgtctgaaatcaccgaatctaacggctcgtcttcaatg
gcgtccgtgtgtggtgcttctctggcactgatggatgctggtgtacccatcaaagcggcc
gtagctggtatcgcgatgggtctggtaaaagacaacgacaactttgttgttctgtctgac
attctgggcgacgaagatcacctgggcgacatggacttcaaagtagccggtagccgtgaa
ggtatcaccgcgctgcagatggacattaaaattgaaggtatcacccgcgaaatcatgcag
gaagcactgaaccaggctaagggtgcgcgtctgcatatcctgagcgtgatggaacaggct
atcagcactccgcgtggcgatatctctcagtttgcaccacgtattcacaccatcaagatc
agcgttgataagattaaagacgtgatcggtaaaggtggttctgttatccgtgcgctgacc
gaagaaactggcaccaccattgaaatcgaagatgatggtaccgttaaaatcgcagcgacc
gacggtgagaaagcgaaatttgctatccgtcgtatcgaagaaatcaccgcagaaatcgaa
gtgggccgtatctacaacggtaaagtgacccgtatcgttgatttcggtgccttcgtcgct
atcggtggtggtaaagaaggtctggttcacatttctcagatcgctgataagcgtgtagag
aaagtgactgactacctgcagatgggccaggaagtgccagtgaaagtactggaagttgac
cgtcagggtcgcgtacgcctgagcatcaaagaagccagcgaacaggcacagcctgaagct
gaagctcctgcagcaccagcacctgaagcagaataa
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