Erwinia rhapontici: LJN55_02815
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Entry
LJN55_02815 CDS
T08392
Name
(GenBank) DEAD/DEAH box helicase
Organism
erp
Erwinia rhapontici
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
UDQ80808
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Position
611508..614060
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AA seq
850 aa
AA seq
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MSSVAYNEKQVIRWLGARTVARARDLVASVQNIQWQNNLLTGEVPGRKAEPFSVIVHFSR
PQGRLLASGECSCAVKNNCKHVAALMLANLQPRQPTAAVVLKTIEAVPVPVLQLQSRAKF
ISGYGHYGHRQKRLDFASVSFDYAGVNVDAGSRAENFTDRNGLRYHVQRHTEEEQSWLAQ
IDTVGLNAIPAGHIYTPAPLPPAIFAPASPPQWRDFIKKGLPALRKRGWRISMDDDFTWN
VSDVDAIEGRAVQGEDGWFDLELAMKIGRRRVRLEPLLAKLFERDRRWMSGNLRLIDDDE
QIEMRDDKNQRLLFRAGQLKPLVGNLIDLFGAHQPLRLAAWDIGRLSESGDRNRWIFDGD
NAVHQLAERLNGHSGVQAIAPPVGLQATLRDYQQQGVNWMQFLRQHQLAGILADDMGLGK
TIQTLAHLLLEKEAGRLDRPALIVVPTTLVHNWCCEARRFAPDLRVLALTGPQRKDFYDQ
MEQYDVVITTYSLLWRDQPQLVAHYYHLLILDEAQYVKNSASRAASVIRTLKTRHRLCLT
GTPLENHLGELWSQFDFLLPGFLGSERDFTQNWRIPVERNGDKVRRELLAKRVRPFMLRR
RKQEVAKELPPKNTIVRSVPLDGAQRELYDQVRAAMQDRVQLAMQQQGPGRSHLLVLDAL
LKLRQICCDPRLMSDPRAERVKHSAKLALLREMLHDLLAEDRRILIFSQFTTMLGIIAEE
LQKARIPYVILTGSTRDRTEPVRRFQQGEVPVFLISLKAGGVGLNLTAADTVIHYDPWWN
PAAENQATDRAYRLGQDKPVFVYKLIAADTIEEKIVAMQQQKAELAGEILDDELSEPSSF
SQDDLAALFS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgtcgcttataacgaaaaacaggtcattcgctggctcggtgcacgtaccgtg
gcccgggcgcgcgatctggtcgccagcgtacagaatatccagtggcaaaataatttgctg
accggcgaggtgccgggacgtaaagcggaacctttcagcgtgatcgtgcatttcagtcgt
ccccagggcaggttgctggccagcggggagtgcagctgtgctgtaaaaaataactgtaag
catgtcgcggcgctgatgctggcgaacctgcaaccccgccagccaacagcggcagtggtc
ctcaaaaccattgaggcagtgcctgtcccggtgctgcaactgcaatcacgtgccaaattt
atcagcggctatggtcattatggtcatcgccagaagcgcctcgattttgcctccgtcagc
tttgactacgcaggcgtgaacgttgatgcaggaagccgggcggagaactttaccgacagg
aatggtctgcgctaccacgttcagcgccatacggaagaggagcagtcctggctggcgcag
atcgacacggtcgggctgaatgccatccccgccgggcatatttatacgccagctccgttg
cccccggcgatcttcgccccggcatcgccgccgcagtggcgtgatttcattaaaaaaggc
ctgccggcgctgcgcaaacgcggctggcgcatcagcatggatgatgatttcacctggaac
gtctcggacgttgatgcgattgaagggcgcgcagtacagggcgaggacggctggttcgat
cttgagctggcgatgaaaattggccgccgacgcgtgcgcctggagccgctgctggcgaag
ctgtttgagcgtgaccgccgctggatgtccggcaatctgcgtctgattgatgatgacgaa
cagattgagatgcgtgacgataagaatcagcgattgctgtttcgcgcgggtcagctaaag
ccgctggtgggcaatctgattgatctgtttggcgcgcatcaaccgctgcgactggccgcc
tgggatatcgggcgtctcagcgagtccggcgatcgtaatcgctggatatttgacggtgac
aacgcggtccatcagctggcagagcgattgaacgggcacagcggtgtacaggccattgcc
ccgcctgttggcttgcaggccaccctgcgcgattatcagcagcagggcgtgaactggatg
cagttcctgcgtcagcatcagctggcgggcatactggccgatgatatggggctagggaaa
acgattcagacgctggcccacctgctgctggaaaaagaagccgggcgcctcgatcgtcct
gcactgatcgtggtgccgaccacgctggtccataactggtgctgtgaagcacggcgcttt
gcccccgatctgcgagtactggcgctgaccgggccgcagcgcaaagacttttacgatcag
atggaacagtacgacgtggtcatcaccacctattcactgctgtggcgcgatcagccgcag
ctggtggcgcactattatcatttgctgatcctcgatgaagcgcagtatgtgaagaacagc
gcctcacgcgccgcctcggtaatccgcaccctgaagacgcggcatcgtctctgcctgacc
ggaaccccgctggaaaatcacctcggggagctgtggtcgcagtttgatttcctgctgccg
ggcttccttgggagcgaacgcgacttcacccagaactggcgtattccggtagaacgcaat
ggcgataaagtcaggcgtgagctgctggcgaagcgcgtacggccgtttatgctgcgccgc
cgtaaacaggaggtcgccaaagagctgccgccgaaaaataccattgtgcgcagcgtgccg
ctggacggtgcgcaacgagaactgtatgaccaggtgcgtgccgccatgcaggaccgcgta
cagttagcgatgcagcagcaggggccgggacgcagccatctgctggtgctggatgccctg
ctaaaactgcgccaaatctgctgcgatccgcgtctgatgtccgatccgcgcgccgagcgg
gtgaaacactctgccaagctggcgctgctgcgcgagatgctgcatgacctgctggcagaa
gatcggcgcatcctgatcttctcgcagttcaccaccatgctgggcatcatcgctgaagag
ttacagaaagcgcgcattccttatgtcatcctgacgggcagcacccgcgatcgcactgag
ccggtacggcgttttcagcagggcgaagtcccggtgtttctgatcagcctgaaagcgggc
ggagttgggctgaacctgacggcggccgacacggtgatccactacgatccctggtggaac
ccggctgctgaaaatcaggccaccgatcgcgcttatcgcctcgggcaggataaaccggtc
tttgtgtataagctgatcgcggccgataccatcgaagagaagatcgtcgcgatgcagcag
caaaaagccgagctggccggagagatcctcgacgacgaactgagtgaaccctccagtttc
agtcaggacgatctggcggcactgttctcctga
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