Erwinia rhapontici: LJN55_03515
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Entry
LJN55_03515 CDS
T08392
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erp03000
]
LJN55_03515
Transcription factors [BR:
erp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LJN55_03515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_8
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UDQ80942
LinkDB
All DBs
Position
complement(769577..770500)
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AA seq
307 aa
AA seq
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MNIDSDITFRKLGIFIAFMNRGNLSRTADALGISSVSVHRALHSLEESVRCPLFIHKGRS
LVPLPAAHTLWEYSQEALDMMSRGVEETRKTAGIGQGHMRLGTLYSLTLETIPQLIMGMK
LRRPDLELELTMGSNQTLTTRLSEGSLDAILIAIAPGDLDYNRFECLPLFDDDIFLAAPS
TSGLDTRFPADLRDFRQQKFVSLAEGFATWQGFQEAFHVAGYAPNIVTRVNDIFSMLSLV
QAGVGFTLLPGRMKRVYENSVQLLRLAEPYQMRQKIGIVFERNREHDPNLLALVAEGRMY
SRQRSTT
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgattcagacatcacttttcgcaaactgggaattttcatcgcctttatgaac
cggggtaatctgtcgcgtaccgctgatgccctcggtatcagcagcgtcagtgttcatcgg
gcgctgcacagtctggaagagagcgtacgctgcccgctgttcattcataaaggccgcagc
ctggtcccgctgcctgccgcgcatacgctgtgggagtacagtcaagaagcgctggatatg
atgtcgcgcggcgtggaagaaacgaggaaaacggcgggcataggacagggacatatgcgt
ctgggaacgctctattcgctgacgctggaaacgattccacagttgattatggggatgaaa
ctacgccgccccgatctggagcttgaactgactatgggttcaaaccagacgctcaccacg
cgcctttcagaaggctcgctggatgccattctgatcgccatcgcccccggtgatctggac
tacaatcgcttcgaatgtctgccgttatttgatgatgatatctttcttgccgcaccttcc
acttctgggctggacactcgcttcccggcggatctgcgcgattttcgtcagcaaaaattt
gtctccctggcggagggtttcgccacctggcagggcttccaggaagcgtttcatgttgcc
ggatatgcaccgaatattgtcacccgggtgaatgatattttctcgatgctgagtctggtg
caggcgggggtggggtttacactactgccgggcagaatgaagcgggtgtatgagaactcc
gtgcagttgctcaggctggccgagccgtatcagatgcgccagaagatcgggattgtcttt
gagcgtaaccgcgagcatgacccgaatctgctggcgctggtggccgaagggcgcatgtac
agccgccaacgcagcacaacataa
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