Erwinia rhapontici: LJN55_03685
Help
Entry
LJN55_03685 CDS
T08392
Name
(GenBank) LacI family transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erp03000
]
LJN55_03685
Transcription factors [BR:
erp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LJN55_03685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
TetR_N
HTH_26
DUF1995
Motif
Other DBs
NCBI-ProteinID:
UDQ82485
LinkDB
All DBs
Position
809096..810118
Genome browser
AA seq
340 aa
AA seq
DB search
MITMLDVAKKAGVSKATVSRVLAGNSYVSKTTQDRVFKAIEETGYRPNLLARNLATNKSQ
NIGLVVTNTLYNGPYFSELLFQAATLTEQHGRQLLLADGKHDARQERQAIEFLLDLRCDA
IIIYPRFLNTAELDEIIEQTRKPIIVVNRQLEKHPQHCVFAAHEQNTLDAVNYLVSQGHR
DIAFISGSDGSPTGISRLKGYREALQAHHIAFNPQRVAQGSWSLQSGYEAGLELLARGAE
FTALVASNDDMAIGAARALSAAGKRIPQDVSLLSFDDIPMASFFVPPLTTVHVPVGEMIR
HTLEKLVLMLDGQPGEPLPAFNGQLIVRESVVAGPYLGRT
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgattaccatgctggatgtcgcaaaaaaagccggtgtttcaaaagccacggtttcacgg
gtgctggcaggaaatagttacgtcagtaaaaccacgcaggatcgggtatttaaagcgatt
gaagaaactggctatcggcctaatttgctggcacgtaatctggcgaccaataaatcacaa
aatatcgggctggtggtcaccaataccttatataacggtccttattttagtgagctgtta
ttccaggcggcaacgttaaccgagcagcatggccgccagctgttactggccgacggtaag
catgatgcccgtcaggagcgccaggccattgagttcctgctggatctgcgctgcgatgcg
atcatcatctatccccgtttcctcaataccgccgaactggatgagattattgagcaaacc
cgcaagccgattattgtggtgaaccgccagctggaaaaacatcctcagcactgcgtcttt
gccgcccatgaacagaacaccctggacgccgttaattatctggtttctcaggggcaccgt
gatattgcctttatttccggctccgacggttcaccgacgggtatcagccgcttgaaaggt
taccgtgaagcgcttcaggcgcaccatatcgcctttaacccgcagcgggtggcacagggc
agctggtcgctccagagcggctatgaagccggtctggagctgctggcgcgcggcgctgag
tttaccgcgctggttgcgagtaacgatgatatggccatcggtgctgcccgggcgctgtct
gccgcgggaaaacgcattccgcaggatgtgtctctgctgagcttcgatgatattccgatg
gcatcgttttttgttccaccgctcaccacggttcatgtccccgttggagagatgatccgg
catacgctggaaaagttggtactgatgctcgatgggcagcccggtgagccgttaccggca
tttaacggccagcttatcgtgcgtgaatcagtggtggcggggccttatctggggcgaacc
tga
DBGET
integrated database retrieval system
