Erwinia rhapontici: LJN55_04385
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Entry
LJN55_04385 CDS
T08392
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
erp
Erwinia rhapontici
Pathway
erp03030
DNA replication
erp03430
Mismatch repair
erp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJN55_04385 (dnaQ)
03430 Mismatch repair
LJN55_04385 (dnaQ)
03440 Homologous recombination
LJN55_04385 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erp03032
]
LJN55_04385 (dnaQ)
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_04385 (dnaQ)
Enzymes [BR:
erp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJN55_04385 (dnaQ)
DNA replication proteins [BR:
erp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJN55_04385 (dnaQ)
DNA repair and recombination proteins [BR:
erp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJN55_04385 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
UDQ81105
LinkDB
All DBs
Position
952789..953541
Genome browser
AA seq
250 aa
AA seq
DB search
MSTVNTTRQIVLDTETTGMNMIGVHYEGHRIIEIGAVEVINRRLTGNNFHVYLKPDRLVD
PEAFGVHGIADEFLLDKPTFAQVADDFLAYIDGAELVIHNASFDIGFMDYEFAKLQRGIA
KTETFCQITDSLAMARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDSEILAEVFLIMT
GGQTSLTFSMEGDREEQDDGETIHRITRPSSGLRVVRASEQERIAHEARLDLVQKKGGSC
LWRPIDASDI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtaaatacaacacgtcagatcgttctcgataccgaaaccaccggtatgaac
atgatcggtgtccactatgaagggcatcgcattattgaaattggtgccgtagaggtgatt
aaccgtcgtctgacgggcaataacttccatgtgtatctcaagcccgatcggctggtggac
ccggaagcctttggcgtacacggtattgcagacgaattcctgctggataaacccaccttc
gctcaggtggcagatgacttcctggcgtatattgatggcgcagagctggtgatccataac
gcgtcgttcgatatcggctttatggactatgagtttgccaaactgcagcgtggcattgcc
aaaaccgaaaccttctgtcagatcaccgacagcctggcgatggcacgtaagatgttcccc
ggcaagcgtaacagccttgatgcgctgtgctcacgctatgagatagacaacagcaaacgt
acgctgcacggcgcactgcttgactccgaaatactggccgaagtcttcctgatcatgacc
ggcgggcagacctcgctgaccttctcaatggaaggggatcgtgaagaacaggatgatggc
gaaaccattcaccgcattacccggccatcctcggggctgcgcgtggtgcgtgccagcgag
caagagcggatcgcgcatgaggcgcgtcttgatctggtgcagaaaaagggcggcagctgt
ttatggcgcccgatcgatgccagtgatatataa
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