Erwinia rhapontici: LJN55_05200
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Entry
LJN55_05200 CDS
T08392
Name
(GenBank) SmdA family multidrug ABC transporter permease/ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
erp
Erwinia rhapontici
Pathway
erp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LJN55_05200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
erp02000
]
LJN55_05200
Transporters [BR:
erp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LJN55_05200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_18
AAA_29
AAA_22
AAA_30
NB-ARC
AAA_23
T2SSE
AAA_16
AAA_21
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UDQ81257
LinkDB
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Position
1111587..1113356
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AA seq
589 aa
AA seq
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MRLFSQLSWYFLREWRRYLGAVLLLIVIALLQLLPPHVVGKIVDGVSRDGMSNGQLMMWV
GVMLATAIIVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPGFYLRHRTGDLIARA
TNDVDRVVFAAGEGVLTLVDSLVMGMAVLIVMSTQISGTLTLLALLPMPIMALVIKRYGD
QLHHRFKLAQAAFSSLNDQTQESLSSIRMIKAFGLEDHQSGQFAAIAKDTGEKNLRVARV
DARFDPTIYIAIGMSNLLAIGGGSWMVWHGTMTLGQLTSFVMYLGLMIWPMLALAWMFNI
VERGSAAWIRIQALLAEAPAVVDGDKPLPEGRGLLQISVREFCYPGAQQPALRNLKVQVN
PGQMLGLCGPTGSGKSTLLSLIQRHFDIDQGDIRYHDIPLPQLQLDGWRSRLAVVSQTPF
LFSDSVANNIALGCPGATQSEIEHAAQLAFVHDDILRLPEGYQTEVGERGVMLSGGQKQR
ISIARALLLNAEILVLDDALSAVDGRTEHQILHNLRSWGEGRTIIISAHRLSALTEASEI
LVLQHGQVAQRGDHEQLAAASGWYRDMYRYQQLEAALDDDETEQGAAHG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
ttgcgactttttagccaactaagctggtattttttgcgcgaatggcgccgctatctcggt
gcggttttgctgttaatcgtgattgccttgctgcaactcctgccaccacatgtggtggga
aagatcgtcgatggcgtcagtcgcgatgggatgagcaacggccaactgatgatgtgggtt
ggcgtgatgctggctacggcaatcatcgtctatttattgcgttatgtctggcgcgtgctg
ttgttcggtgcctcctatcagttggcggtagaactgcgtgaagatttttatcgccagctc
agccgtcagcaccccggattctatttacgccatcgtaccggtgatctgattgcccgtgcc
actaacgatgttgaccgggtggtgttcgcggcaggcgaaggcgtactgacgctggtggat
tcactggtgatgggcatggccgtactgattgtgatgagtacccagattagcggtacctta
accctgcttgccctgttaccgatgccgatcatggcgctggtgatcaaacgttacggcgat
cagttacatcatcgctttaagctagcccaggctgctttctcctcgctaaacgaccagacg
caggaaagcctgagcagcatccgtatgattaaagccttcgggctggaagatcatcagtca
ggccagtttgcggcgattgctaaagacaccggagagaagaatctgcgcgtggcgcgggtg
gatgcacgcttcgatccgacgatctacatcgctattggcatgtcaaatctgctggcgatt
ggcggcggcagctggatggtctggcacggcacaatgaccctcgggcagctcaccagcttt
gtcatgtatctggggctgatgatctggcccatgctggcgctggcgtggatgtttaatatt
gtcgagcgtggtagcgccgcctggatacgaatccaggcattgttagcagaagcgcctgcc
gtggttgatggagacaaaccgttgccagaggggcgcggcctgttgcagatttcggtgcgg
gagttttgttaccccggggcgcagcaacctgcgttgcgtaatctgaaggttcaggttaat
ccagggcaaatgctggggctttgtggcccaacgggatcgggtaaaagcactttactcagt
ttgatccagcgtcacttcgatattgatcagggcgatattcgttaccacgatatccctctg
ccgcagttgcagctcgatggctggcgtagccgactggcggtagtcagtcagacgccattc
ctgttctccgacagcgtcgctaacaatattgcgctggggtgtcctggtgcaacgcaaagt
gagattgagcacgctgcacagcttgcctttgttcatgacgacattttacggctccctgag
ggctatcaaactgaagtgggcgaacgtggtgtgatgctgtcgggtgggcagaaacaacgt
atctccattgcccgggcattgctgctgaatgccgagattctggtgctggatgatgccctc
tctgcggtagatggccgcactgaacaccaaatcctgcataacctgcgcagttggggcgaa
ggacgtacgattattatcagcgctcatcgtctctctgccctgaccgaggccagtgaaatt
ctggtcctgcaacacgggcaggttgcgcagcgtggcgatcatgagcaactggccgccgct
tcaggctggtatcgcgatatgtaccgttaccaacagctggaagcggcactggacgacgat
gaaacagaacagggagctgcgcatggctaa
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