Erwinia rhapontici: LJN55_07480
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Entry
LJN55_07480 CDS
T08392
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erp03009
]
LJN55_07480
Ribosome biogenesis [BR:
erp03009
]
Prokaryotic type
ribosomal protein modification factors
LJN55_07480
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
UDQ81669
LinkDB
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Position
complement(1575137..1576894)
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AA seq
585 aa
AA seq
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MTQTYIPGKDAALEVSIARFQQKLQDLGFNIEEASWLNPVPNVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGEKIANGDFVHYPNEKWFPLPEDDQLPEG
ILDPRLRKFYDPENEVSASELVDLQSGNAARGICGLPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERYIKNRIIAESISLPAIPQDVLNRYPGVVEAIASLEAE
GFPIFSYDASLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKDDADYPFVDWSFKGSTEEEFSTLM
DIFKSEDQEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNSMGAYLRDTLLSLPES
SWEKEDYLSLLEQLDEDGHDDFTRVRELLGLATGKDNGWYTLRIGELKAMLALAAGDLEQ
ALIWTEWTMEFNQSIFSAERANYYRCLQTLLLLSQEEGRDPLQYHTAFVRMYGQEAVDTA
SAAISGEAPFYGLQAVDNDLKAFPAHQSLLAAYEKLQAAKRLYWK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacttatatcccaggcaaagacgccgcgttggaagtttccatcgcacgcttt
cagcaaaaactgcaggatcttggcttcaacatcgaagaagcatcctggctgaacccggtc
ccgaatgtctggtcagttcatatccgcgatcgcgactgcccgctgtgttttaccaatggt
aaaggcgcgagcaaaaaagcggctctggcctctgcgctgggcgaatactttgaacgcctg
tccaccaactatttcttcgctgacttctggttaggcgagaagatcgctaacggcgacttc
gttcactaccctaacgagaagtggttcccactgccggaagatgaccaattgccagaaggc
attctggatccacgactgcgtaaattctacgacccggaaaacgaagtgagcgccagcgaa
ctggttgacttgcagtcgggcaatgccgcacgcggcatctgtggcctgccgtttacccgt
cagtcggatcagcaaaccgtttacatcccgatgaacattatcggcaacctgtatgtatca
aacggtatgtctgccggtaataccgccaacgaagcccgcgttcaggggctgtcagaggta
ttcgagcgctatattaaaaaccgtattatcgcggaatcaatcagcctgccagccattccg
caagacgtgttaaatcgttatccgggcgttgtcgaagccatcgcctcgctggaagcagaa
ggtttcccaatcttctcttacgacgcctcactgggcggtaaatatcctgttatctgtgtg
gtgctgtttaaccctgctaatggcacgtgcttcgcctcctttggtgctcaccctgacttt
ggcgtagcgcttgagcgtaccgtcaccgaactgcttcaaggtcgtggcctcaaagatttg
gatgtgttcacaccgccgaccttcgacgatgaagaagtggcggaacacgccaacctggaa
acacactttatcgattccagcggtctgatctcgtgggatatgtttaaggatgacgccgat
tatccgtttgttgactggagctttaaaggcagcactgaagaagagttctcgacactgatg
gacatcttcaagtcagaagatcaggaagtttacatcgcggactatgagcatctggatgtg
tacgcttgccgcatcatcgtgccgggcatgtctgatatctacccggcagaagacctgctg
ctggcgaacaacagcatgggtgcttacctgcgcgatacactactcagcctgccggaaagc
agctgggaaaaagaagactatctgtctctgctggagcagctggatgaagacggccatgac
gacttcacacgtgtacgcgaactgctgggccttgcaacgggtaaagataacggctggtac
acactgcgtattggtgaacttaaggcgatgttagcactggcagcaggcgatctggaacag
gcattgatttggacggaatggaccatggagttcaatcagtcgatcttcagcgccgaacgc
gccaactactatcgctgcctgcaaacactgctgttattgagccaggaagaaggtcgcgac
cctttgcagtatcatacggcattcgtccgtatgtatgggcaggaagccgtagacacagct
tcagcagctatcagtggtgaagcgccattttatggtttgcaggcggttgataacgatctg
aaagcgttcccggcacaccaatctctgctggcggcttatgaaaaacttcaggcggccaaa
cgtctttactggaaataa
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