Erwinia rhapontici: LJN55_12180
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Entry
LJN55_12180 CDS
T08392
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
erp02000
]
LJN55_12180
Transporters [BR:
erp02000
]
Other transporters
Pores ion channels [TC:
1
]
LJN55_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF7155
Motif
Other DBs
NCBI-ProteinID:
UDQ78254
LinkDB
All DBs
Position
complement(2587754..2590135)
Genome browser
AA seq
793 aa
AA seq
DB search
MIKFSSRQGLLHTSLVVGTLFTAAVSTPLTAAEQTDESSAKARQQNTPQDDAVMTVLSPE
VKKVAGSSVTLNAADMQQRGGNNFGTIMRYQPLIGAVGSSSGSSTGKSGFDRGGYTGYNI
RGLEGNRVALDVDGIPQPEATGRSYASRAGVNTFGIGRDYIDPYLYGRVEIESGATITSR
ANTALGGTVSFLPKSADDYLTPGKHTAFGFQSDYDSSSRSWHNGITAATGDETLRGLMVY
SRRDGQQTRNNSDELDAYPENWHSDALLTSAIWQPNDEHKLTGTVDFYSKVNHSRYDSWA
TDGNTLLGDANQQSNTRRWGVSLKDEWTPGNDWVDSLSNKIYYQHTEAHDNTLMPLGTAG
AMQRVYSDYNVETYGYEAQLAKTLGRHDLLAGINGRLSETERPFSQSPAQSGTSMTTKPE
GDSRTLVLGAFVQDSILFDLDGHAFSVVPGVRVAHQETKPQNLANMAAGTDVLTPADAEK
LYGKTNSDTQLLPSISFNYDITPQLMTYVQYKRGAQFPNASQLYGSWNLGSSYAGNSQYA
LLGNTDLETETSNNVEWGVKGQATEGVTLHGAMFYNTYKNFIASTRYSRATAPDKFVNVP
ANIATIYQAENRDKAYIWGGEVSTKINYGTWFDQVNGLSTTFALGYSKGQAKSRYDGDKY
VDLDSVAPMKAVVGVAFDDPAQRFGTAITATFVKGKQAQSTNRNSYQNSGGALTDATTEY
ARVPGYGMVDMTAWVKVTKNVKLSGGVYNLTDRKYWDYLSSRNMTGETQVDINDRSLAVQ
PGRNFQLGVNVDF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgattaagttttcatcccgccagggattactgcacacgtctctcgtcgtggggacactg
ttcaccgccgccgtctccacgccgcttaccgcggctgagcagaccgatgaatcgtccgcc
aaagcccgccaacaaaacacgccgcaggatgatgcggtgatgaccgtcttgtcgccagaa
gtgaagaaagtggcaggaagttcagtcacccttaatgctgccgatatgcagcagcgtggt
ggcaataacttcggcaccatcatgcgttaccagccgctgatcggcgcggtaggcagcagc
agcggttcttccacgggcaaaagcggcttcgaccggggcggctacaccggctataacatc
cgtggcctggaaggtaaccgcgtggcgcttgacgtcgatggcatcccgcagccagaagcc
accgggcgcagctacgccagccgtgccggggtgaacaccttcggcatcggccgtgactac
attgacccttatctctacggtcgcgtcgagattgaatctggcgcaacgataacgtcacgt
gcgaataccgcactgggcggtaccgtttccttcctgccgaaatcagccgatgattatctg
acgccgggcaaacacactgcgtttggcttccagagcgattacgactcctccagccgcagc
tggcataacggcatcaccgctgccaccggggatgaaaccctgcgtggtctgatggtgtac
agccgccgtgatggtcagcagacccgtaataacagcgatgaacttgacgcttacccggaa
aactggcactccgacgcgttgctgacgtccgctatctggcagccgaacgatgagcacaag
ctgaccggaacggtcgatttttacagcaaagtgaatcacagccgctatgacagctgggcc
actgacggcaataccttactgggcgatgcgaaccagcaaagcaacacccgccgctggggt
gtcagcctgaaagatgagtggacaccgggtaacgactgggtcgacagcctgagtaataaa
atttattaccagcacactgaagcacacgacaatacgctgatgccattaggcactgcgggt
gccatgcagcgcgtgtactctgattacaacgtggaaacgtacggctacgaagcccaactg
gcgaagacgctgggtcgccacgatctgctggccgggatcaacgggcgactttcagaaacc
gaacgcccgttcagccagtctccggcacagagcggcaccagcatgaccaccaaacctgag
ggtgacagccgtaccctggtgctgggcgcgtttgtgcaggacagtatcctgtttgacctt
gatggtcatgcgttctctgtggtgccgggcgtgcgtgtggcgcatcaggaaaccaaaccg
cagaacctcgccaatatggccgcgggcacggatgtgctgacgcctgccgatgcagagaag
ctgtacggaaaaaccaacagcgatacgcagctgctgccgtccatcagctttaactatgat
attaccccgcagctgatgacctacgtgcagtacaagcgcggcgcgcagttcccgaacgcc
agccagctgtatggttcatggaacctcggttccagctacgccggaaacagtcagtatgcc
ttgctgggcaataccgatctggaaacggaaaccagtaacaacgttgaatggggcgtgaag
ggccaggcaacggaaggcgtaacgctgcatggtgcgatgttctataacacgtacaaaaac
tttattgcgtcgacccgttattctcgcgctacggcaccggataagttcgttaacgttcct
gcgaatatagccactatctatcaggcagaaaaccgtgataaagcctatatctggggcgga
gaagtcagcaccaaaatcaactatggcacctggtttgatcaggttaacggcctgagtacc
acctttgcgttgggctacagcaagggccaggcaaaatcccgctatgatggcgacaagtat
gttgacctcgacagcgtggccccgatgaaagccgtggttggcgtggcgtttgacgatccg
gcgcagcgctttggtacggcgatcaccgcgacttttgttaaagggaagcaggcgcagagc
accaaccgcaacagctaccagaacagcggaggcgccctcacggacgccaccacggaatat
gcgcgcgtgcccggttacggcatggtggatatgacggcctgggtgaaagtgacgaagaac
gtgaagctgagcggtggggtatataacctgaccgatcgtaaatattgggattatctcagc
agccgtaatatgaccggggaaactcaggtggatatcaacgaccgctcactggccgtccag
ccaggacgtaacttccagttaggtgtgaacgtcgatttctga
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