Erwinia rhapontici: LJN55_12440
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Entry
LJN55_12440 CDS
T08392
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
erp
Erwinia rhapontici
Pathway
erp02010
ABC transporters
erp02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LJN55_12440
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
LJN55_12440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
erp02000
]
LJN55_12440
Transporters [BR:
erp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
LJN55_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UDQ78302
LinkDB
All DBs
Position
complement(2649803..2651395)
Genome browser
AA seq
530 aa
AA seq
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MKKAVLRTVLAALALTVTSAVSAKTLVFCSEGSPENFNPQLYTSGTSVDASAVPIYNRLV
DFSPGTTQLIPSLAESWDISPDGTVYTFHLRKGVKFHSNKNYKPTRDFNADDVIFSFMRQ
KDPANPYHKVSNGSYTNFESLEFGTLLKGIDKIDDHTVRFTLAHAEAPFLADLGWYFASI
LSAEYADAMLKAGTPEKVDREPIGTGPFELAQYQKDSRILYRAFPQYWQGKAKLDRLIFT
ITPDASVRAAKLEKNECQVMPFPNPADLKRLEENPNITMMQKAGLNTGFLAFNTQKAPLD
NVKVRQALSMAINKSAIIEAVFQGTGTAAKNLLPPGVWSADKDLKDYDYAPDQAKALLKE
AGIAPGTTIDLWAMPVQRPYNPNARRMAEMIQADWAKVGIKANIVSFEWGEYLSRVKNGE
HQAALMGWTTATGDPDNFFGPLFSCTSANGGSNSAKWCYAPFDQLITKARAEQDHDKRVV
MYREAQQIMHDQAPAVMIAHSTIFEPVRKEVTGYEVDPFGKHIFYQVDVK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcggtattacgcacggttctggcggctctggcgctgaccgtcacttcagcg
gtttcggcaaaaacgctggtgttctgctctgagggatcgccagaaaactttaacccgcag
ctgtacacctcaggcaccagcgtggatgccagcgcggtgccgatttataaccggcttgtc
gattttagccccggcaccacccagttgatcccctcgctggccgaaagctgggatatcagc
ccggacggcacggtttacaccttccatttgcgtaagggcgtgaaattccatagtaataaa
aactacaaaccaacgcgtgattttaacgccgacgatgtcatcttctcgtttatgcgccag
aaagatcccgccaacccttatcacaaggtgtctaacggcagttacaccaacttcgaaagc
ctggagttcggcaccttgctgaaaggcatcgataagattgacgatcacaccgtgcgcttt
acgcttgcccatgcggaggcgccattcctcgccgatctcggctggtactttgcctcgatt
ctctcggccgaatatgccgatgcgatgctgaaagcgggcacgccggaaaaagtggatcgt
gaaccgatcggcaccgggccctttgaactggcgcaataccagaaagattcgcgcatcctg
taccgtgcgttcccgcaatactggcagggtaaggcgaagctggaccgtctgatcttcacc
attacgccggatgcctcagtgcgcgcggccaagctggagaaaaacgagtgtcaggtgatg
ccgttcccgaatccggccgatctgaagcgcctggaggaaaacccgaatatcaccatgatg
caaaaagcagggctgaacaccggattcctcgcgttcaatacgcaaaaagccccgctggat
aatgtcaaagtgcgtcaggcactcagcatggcgattaacaaatctgcgattatcgaggcg
gtattccaggggacgggcaccgcagcaaaaaacctgctgccgccgggcgtatggagcgcg
gataaagatctgaaagattacgactatgcgccagatcaggcgaaggctttgctgaaagag
gcgggcattgcaccgggtaccaccattgacctgtgggcgatgccggttcagcggccttac
aacccgaatgcacggcgtatggcggagatgatccaggcggactgggcgaaggtcggcatc
aaagccaatatcgtcagctttgagtggggcgaatatctctcaagggtgaaaaacggcgaa
catcaggcggcactgatgggctggaccacggcaacgggcgacccggataacttcttcggc
ccgttgttcagctgcacctctgccaacggcggttccaactcagcgaagtggtgctatgcg
ccgtttgatcagctgattaccaaggcgcgtgccgaacaggatcacgacaagcgggtagtg
atgtaccgcgaagcgcagcagatcatgcacgatcaggcgccagcggtgatgattgcccac
tcgaccatctttgaaccggtacgcaaagaagtgacgggttatgaagtggacccgtttggc
aaacacatcttctatcaggtggatgtgaaataa
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