Erwinia rhapontici: LJN55_13080
Help
Entry
LJN55_13080 CDS
T08392
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
erp
Erwinia rhapontici
Pathway
erp00061
Fatty acid biosynthesis
erp00071
Fatty acid degradation
erp01100
Metabolic pathways
erp01212
Fatty acid metabolism
erp02024
Quorum sensing
erp04146
Peroxisome
Module
erp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LJN55_13080 (fadD)
00071 Fatty acid degradation
LJN55_13080 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LJN55_13080 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJN55_13080 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
erp01004
]
LJN55_13080 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
erp04147
]
LJN55_13080 (fadD)
Enzymes [BR:
erp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LJN55_13080 (fadD)
Lipid biosynthesis proteins [BR:
erp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LJN55_13080 (fadD)
Exosome [BR:
erp04147
]
Exosomal proteins
Exosomal proteins of breast milk
LJN55_13080 (fadD)
Exosomal proteins of breast cancer cells
LJN55_13080 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UDQ78419
LinkDB
All DBs
Position
complement(2793076..2794761)
Genome browser
AA seq
561 aa
AA seq
DB search
MHKVWLNRYPADVPAEINPDRYGSLIDLFEHAVLRYATQTAFINMGKSLTFQQLDDRSRA
FAAYLQQGLGLKKGDRIALMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVAKTTVKHVILTRLGDQLSPAKGTLVNFVVKYIKKMVPKYYL
PGAISFRQALQNGAQMEYVKPTIINDDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQTKA
TYGSLLKAGEETVVTALPLYHIFALTVNCLLFIELGGANLLITNPRDIPGLVKELSKHPF
TAITGVNTLFNALLNDDAFNKLDFSTLTLSAGGGMAVQKAVAERWEKLTGHYLLEGYGLT
ECSPLVSVNPYDIQCHNGSIGLPVPSTDIMLVDDNGNEVPEGEPGELCIKGPQVMLGYWQ
HPDATDEVLKNGWLRSGDIVTVDHEGFLRIIDRKKDMILVSGFNVYPNEIEDVLMLHPKV
REAAAIGVPNDVAGETVKVCVVKKDDSLTKEELITHCKRHLTGYKIPRIVEFRDELPKTN
VGKILRRELREEAIKAQPPLD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgcataaggtttggttaaaccgttatccggcggatgttccggcggagattaatcctgat
cgttatggctctttaatcgatctgtttgaacacgcggtattgcgttacgctacgcaaacg
gcgtttatcaatatggggaagagtcttactttccagcagctcgatgaccgcagtcgggcc
tttgcggcctatttacaacagggattagggctaaagaaaggcgaccgtatcgcactgatg
atgcccaatctgctgcaatatccgatcgcgctgtttggcattcttcgtgccggaatgatc
gtggttaacgtcaatccgctttataccccgcgagaactggaacatcagctcaatgacagc
ggtgccagcgctattgtgattgtctctaacttcgcccatacgctggaaaaagtggtggcg
aagacaacagtgaagcatgtgatcctcacccgcctgggtgaccagctttcgcctgcgaag
gggacattggttaacttcgtggtgaagtacattaaaaagatggtgccgaaatactatctt
cccggtgcgatatctttccgtcaggcgctgcaaaacggtgcgcagatggagtatgtcaaa
ccgacgatcattaatgacgatctcgctttcctgcaatataccggtgggaccaccggggtg
gcgaaaggggcaatgctgacccaccggaatatgcaggcaaacctcgaacaaacaaaagcc
acctacggctcgctgttgaaagcgggtgaagaaaccgtggtaacggcattgccgctgtat
catatcttcgccctcacagtgaactgcctgctgtttatcgaactggggggggctaacctg
cttatcaccaatccgcgtgatattccggggctggtcaaagaactgagtaaacatcctttc
accgctattacgggggtgaatactttgtttaatgcgctgctcaatgatgatgcctttaat
aaactggatttctccacgctgacgttatccgcaggcggcgggatggcggtacaaaaagcg
gttgccgaacgctgggaaaagctgacaggtcactatctgctggaaggatacggtctgacc
gaatgttccccgctggtttcagtgaacccgtatgatattcagtgccacaacggcagcatt
ggcctgccggttccctctactgatattatgctggtggatgataacggtaatgaagtgcca
gaaggggagccgggtgagttgtgcataaaagggccgcaggtcatgctgggctactggcag
cacccggatgcgaccgatgaagttttaaaaaatggatggcttcgcagcggtgatattgtt
accgttgatcacgaaggtttcctgcgtattatcgatcgtaaaaaggatatgattctggtt
tccggtttcaatgtttatcctaatgagattgaagatgtcctgatgctgcacccgaaagta
cgtgaagccgccgccatcggtgttccaaatgatgtggcgggcgaaacggtgaaagtttgt
gtggtgaaaaaagatgattcactgaccaaagaagagcttatcacccactgcaagcggcat
ctgacaggctataaaatacccagaattgttgagtttcgggatgagcttccgaaaaccaac
gtcggcaaaatcctgcgccgtgaactgcgcgaggaagcgataaaagcccaacccccctta
gactga
DBGET
integrated database retrieval system
