Erwinia rhapontici: LJN55_14250
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Entry
LJN55_14250 CDS
T08392
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
erp
Erwinia rhapontici
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Motif
Pfam:
TrwB_AAD_bind
T4SS-DNA_transf
TraG-D_C
DUF87
AAA_10
Motif
Other DBs
NCBI-ProteinID:
UDQ78631
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Position
3041440..3043314
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AA seq
624 aa
AA seq
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MILNKLAVSLSPIVNGALSFMAFMQQHQLMLALLSGLTMPFFASMKSDERQKAPLWQKLI
IAFSLLCFLSGTMAPVVIWIFQWLYKGRVVASIPVLAWPVLIAFTVTGFILHILLRRVLT
PELDNIKKRLVRKTTLERELRTDVRTVKSLLPETLHYDPLDYIDLNKGLFIGVDRDIQPM
YLPLKDWQKQHADIIGTTGAGKGVATGILLYQSILAGEGVFVMDPKDDEWAPHLYRKACE
DAGKPFALIDLRKPQYQLNLIEEITADELEELFVAGFSLAEKGQESDFYRIDDRKAARIA
AQFVTRNPTATIRDVYKGDYVQGIADKIKAFFGKIEELALLDAINAPTGFSLNTVFEEGG
CCYVIGSMRNSKIITAQRMLLVRLYQLAERRERVKNVPRPIAIYLSELKYHLSRPALEGL
GAARDKGVHIIMDHQSIADLKDCPADLKGDAVVGAVVENAKFKLVYRVMDPDTAEWVARM
SGTILVDDEVRKAKTDAVLTETIDSERTIRQAERFFTDSNMILNLPDFVSFIFTTKTLPA
ASLISPIRVKKRELEICAVSPAIAATAATVNISLDFSEEETSPDPASTPNITTTRPDLFF
DETGEKDTTIPNADQEENPSLLDF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgattttgaataagctggccgtttcactgtcgccgatagtgaatggcgcgctgagcttc
atggcttttatgcaacagcatcagctgatgctggcgctgttatcggggctgacgatgccg
tttttcgcgtcgatgaaaagcgatgaacggcaaaaagccccgttgtggcaaaagctgatt
attgctttttccctgctgtgtttcctttccggtacgatggccccggttgttatctggatt
ttccaatggctttataaaggccgtgtagttgccagcattcccgttctggcatggccggtg
ctgattgcctttaccgtaacgggttttattttgcatattctgctgcgcagggtattaacc
cctgaattagacaacataaagaaacgcctcgtcagaaaaaccacgcttgaacgggaattg
cgcaccgatgtccgcacggttaaatcactgctgccggaaacgctgcattatgacccgctg
gattatatcgacctgaacaaagggttatttatcggcgtggaccgagatattcagccgatg
tatttgccgttaaaagactggcaaaaacaacacgcggatattatcggcactaccggcgcc
ggtaagggcgttgccaccgggatattactttatcaaagtattctggccggtgaaggcgta
tttgtgatggaccccaaggatgatgaatgggcaccgcacctttaccgcaaagcctgcgag
gatgcagggaaaccctttgccctgattgacctgcgaaaaccccagtaccagttaaacctg
attgaagagatcaccgccgatgagctggaagagcttttcgttgccggtttcagtctggca
gagaaaggtcaggagtcagacttttatcggattgacgaccggaaagcggcccggatagcc
gcacaatttgtcacccgtaatcccactgcaaccattcgggatgtgtataaaggcgactac
gttcagggtattgccgataagataaaagcctttttcgggaaaattgaagagctggcttta
ctcgatgccattaatgcccccaccgggttttcgcttaatacggtatttgaggaaggcggt
tgctgttatgtgattggttcaatgcgcaacagcaaaatcattaccgctcaacgcatgctg
ctggttcgcctgtaccagctggcagaaaggcgcgagcgagtgaaaaacgtgccccgcccc
attgctatttatctttccgaactgaaataccatttatccagacccgcgctggaaggctta
ggcgcggcacgcgataaaggtgtacatattattatggaccatcagtcgattgccgattta
aaagactgcccggcagatttgaaaggcgacgccgttgtcggcgcggtcgttgagaacgcc
aaattcaaactggtttatcgtgtcatggatccggacactgctgaatgggtggcaaggatg
tcaggcactatattagtcgatgatgaggtccgcaaagcgaaaaccgatgccgtgctgaca
gagactatcgacagtgaacgcaccatcaggcaggccgagcgtttctttaccgacagcaat
atgatcctgaacctacccgatttcgtcagcttcatcttcacgacaaaaacactcccggct
gcttcgctgatttcgcccatcagggtgaaaaaacgcgaactggagatctgtgccgtgtcg
cccgcgattgccgccaccgccgcaacggtaaacatatccttggattttagcgaggaggaa
acctcccccgaccccgcatcaacgccgaatatcaccacaacgcggcccgatctttttttt
gatgagacgggcgaaaaagacacgacaataccgaatgccgatcaagaggaaaacccgtca
ttgctggatttttaa
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