Erwinia rhapontici: LJN55_14405
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Entry
LJN55_14405 CDS
T08392
Name
(GenBank) LysR family transcriptional regulator
KO
K26290
LysR family transcriptional regulator, regulator of pal gene cluster
Organism
erp
Erwinia rhapontici
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erp03000
]
LJN55_14405
Transcription factors [BR:
erp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LJN55_14405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
FilR1_N
HTH_30
CMV_1a_C
Motif
Other DBs
NCBI-ProteinID:
UDQ78661
LinkDB
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Position
3084256..3085185
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AA seq
309 aa
AA seq
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MDKILRQFIEVAMFKNVSHAANKLCLSQPTVTHNMKKLEESLGVQLLERTSTGVKTTEYG
DLLLEQAQMMQRIYENTLTKLAFIKARQVQSLRMGTGHAWWHLFIRDSFTAYRTLHPTVN
IHIDQGNHLRLMDLLLGGDIDLFVGHEIQGLNSKAGMSFVPLFSVTDSLFVRQGHPLSNR
VIEPVELQDYPCVELTPDEGRFQHMMEDMQPKRQARNRMHLEERVIWSTNSMMAAVDMIN
ESDAVMLSYPLCMADYFSRHKIVPLQTTQPSPRYNVGFYLMREKRDTAHVVQMQELMQQH
LEPIRHLLV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaattcttcgtcagtttattgaagtcgcgatgttcaaaaatgtgagtcatgct
gcaaacaaactttgccttagccagcccaccgttactcataatatgaagaagttagaagag
agtctgggcgtgcagctgctggagcgcacgtcaacgggcgtgaagaccaccgaatatggc
gaccttttgctggagcaggcgcaaatgatgcagcggatttatgaaaatacgctgacaaaa
ctggcgtttatcaaagcacgtcaggtgcaaagcctgcgaatgggcacggggcatgcctgg
tggcatctgtttatccgcgacagcttcaccgcttaccgaacgctgcaccctaccgtcaat
attcacatcgaccagggaaaccatctcaggttgatggatctgttactggggggggatatc
gatctgtttgtcgggcatgaaattcagggtctgaattcgaaggcggggatgagctttgtg
ccgctgtttagcgtcactgacagcctgtttgtccggcagggtcatccgctgagcaacaga
gttatcgaaccggttgaactgcaggactatccttgtgtggagctgacgccggatgagggt
cgctttcagcatatgatggaagatatgcaaccgaaaaggcaggcaagaaaccgcatgcat
ttagaagagagggtgatctggtcaactaactcaatgatggcggcagtcgatatgatcaac
gagtcggacgccgtgatgttgagctatccgttatgcatggctgactacttttctcgccat
aagattgttcccttgcaaaccacgcaacccagcccacgctataacgtcggcttttatttg
atgcgtgagaagagggacacggctcacgtggtgcaaatgcaggaactgatgcaacagcat
cttgagccgatccgccacctgctggtttaa
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